Raoultella ornithinolytica B6: RORB6_16230
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Entry
RORB6_16230 CDS
T02625
Name
(GenBank) lipopolysaccharide ABC transporter permease
KO
K11720
lipopolysaccharide export system permease protein
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RORB6_16230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ror02000
]
RORB6_16230
Transporters [BR:
ror02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
RORB6_16230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
AGJ87927
LinkDB
All DBs
Position
complement(3568080..3569162)
Genome browser
AA seq
360 aa
AA seq
DB search
MQAFGVLDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGLYTILSV
PKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRLQVALAVMKTAIPLVLLTMAI
GEWVAPQGEQMARNYRAQQMYGGSLLSTQQGLWAKDGHNFVYIERVKGNDELGGVSIYAF
NDQRRLQTVRYAASAKFDNDNKVWRLSQVDESDLTDPKQITGSQMVSGTWKTKLTPDKLG
VVALDPDALSISGLHNYVTYLKSSGQDPGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPL
RSVAMGVRVVTGISFGFIFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMMRKA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttggcgtactcgaccgttatatcggtaggacgattttcaacaccatcatg
atgacgctgttcatgctggtttcgctctcgggcattatcaagtttgtcgaccagttgaaa
aaagccggccagggcagctacgacgcgctcggtgccgggctgtataccatcctcagcgtg
ccaaaagatgtgcagattttcttcccgatggcagcgctgcttggcgcactgcttggcctg
gggatgctggcgcagcgcagcgaactggtggtgatgcaggcctccggcttcacccggtta
caggtagcgctggcggtgatgaaaaccgcgattccgctggttctgctgactatggcgatc
ggggagtgggtggcgccgcagggcgagcagatggcgcgtaattatcgcgcccagcagatg
tacggcggttcgctgctgtcgacccagcaggggctgtgggcgaaagacggccataacttc
gtgtatatcgaacgggtgaaaggaaacgatgaactgggcggcgtgagtatttacgccttt
aacgaccagcgccgtttgcagaccgttcgctacgccgcctcggcgaaattcgacaacgat
aataaagtctggcgcctgtcgcaggttgatgagtctgacctgaccgacccgaaacagatc
accggctcgcagatggtcagcggcacctggaaaactaagctgacgcccgacaagctgggc
gtggtggcgctggatccggatgcgttgtcgatcagcggcctgcataactacgtgacctat
ctgaaatccagcggacaggacccgggacgctaccagctcaacatgtggagcaaaatcttc
cagccgctgtcggtggcggtgatgatgctgatggcgctgtcgtttatcttcggcccgctg
cgcagcgtggcgatgggggtaagggttgtcaccgggatcagctttggctttatcttctac
gtgctggaccagatttttggcccgctgacgctggtctacggcatcccgccgattatcggc
gcgctgctgccaagcgccagcttcttcctgatcagcctctggctgatgatgcgtaaggcg
taa
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