Raoultella ornithinolytica B6: RORB6_18635
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Entry
RORB6_18635 CDS
T02625
Name
(GenBank) Pectate disaccharide-lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror00040
Pentose and glucuronate interconversions
ror01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RORB6_18635
Enzymes [BR:
ror01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
RORB6_18635
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Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
AGJ88407
LinkDB
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Position
complement(4117110..4119281)
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AA seq
723 aa
AA seq
DB search
MNKKIPLSLALCSTIIALPLQADEQHVWRGIAFGQSTDVNFSSNVLPEKIGVNDVTIAGK
KLAPQDTANLQAPITIESRGGKIANSHDGLTFFYTELPARQNFILQATVTVDQFGPENGA
LPAAQEGAGLLVRDIIGHPRQQPLVVGYEEFPAASNMVMNAIMTQDKKDRSHVKLQAISR
EGIAQPWGNAGSTINRLSYKENIDLKQTPDFQLRLERTNEGFVTSWAPVGSDKWVSQKVP
HADLITQQDKDSYYVGFFASRNAKITVSHASLVTSPANTVASQPYVAKTWPVVMQIASGA
VSQSADYVLQARASGDGNFTVRQDEVTIGMNKKVKAGEMFTQPATLKEKSTFEIVFTPTS
SQKPITQGLTVERSHRIEGSTLHVSPEGLSDAKGTLDSPLDLSTAVDLLPPGGKIILAAG
DYPQTVIPLQASGLREKVKTLQADDKAVIHGLLLDANYWHIKGISITDKSLRIQGSHNLI
ENVTAYKNEDTGIQISSPDKTDRPLWASYNRVVNSESYGNEDPGKINADGFAVKMRVGEG
NRLEGCYSHDNIDDGFDLFNKIEDGANGVVVIENSIARNNTSNGFKLGGEGQPVAHEIRN
SIAIGNHLDGFTDNFNPGKLVVVNNVAVDNQRFNYLFRPSPYGKPETQGNFSDNLSLRSQ
PGKYDDAVVGNIEDNNYFIRGGKSVNAEGKTILSTDYQTLALPDPLLRHADGSFATGDFL
NRR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaaatacctttgtcattagccctttgcagcacaattatcgcattaccgctg
caggctgacgagcagcatgtctggcgaggcatcgcttttggtcaatcaactgacgtgaat
ttttcctccaacgtgctgccggaaaagatcggcgttaacgacgtaacgatagcaggcaaa
aaactggctccgcaggatactgccaacctccaggcccccatcaccattgagagccgcggc
ggaaaaatagccaattcgcacgacggtttgaccttcttttataccgaactaccggcccga
cagaatttcatcctgcaggccacggtgacggtggatcaatttggtccagaaaatggcgcc
cttccggctgcacaggagggcgccgggctgctggtacgcgatatcatcggccatccgcgg
cagcagcctttggtggttggctacgaagagtttccggcggcatccaatatggtcatgaac
gcgattatgacccaggataaaaaagatcgctcgcacgtcaaactccaggccatctcccgg
gaagggatcgcgcaaccgtggggaaacgcaggttcgactatcaaccggctgagttataaa
gagaatatcgatcttaaacagacaccggacttccagctcagactcgaacgaaccaacgaa
ggatttgtaacatcatgggcgccagtcggcagcgataagtgggtgagccaaaaagtgcct
catgccgatctgatcacccaacaggataaagatagctactacgttggcttttttgcctct
cgtaacgccaaaatcaccgtcagccatgcatctctggtgacatccccggcgaataccgtt
gcttcacagccctatgttgccaaaacctggccggttgtgatgcaaatcgcctcaggcgca
gtaagccagagcgcagattacgtattgcaggcccgggccagtggcgacggtaacttcacg
gttcgtcaggatgaggtgacgattgggatgaataaaaaggtcaaggccggtgagatgttt
actcaacccgcgacgctcaaagagaaaagtacctttgagattgtttttacacccaccagc
agccaaaaacccatcacacaaggcctgacggttgaacgcagccaccgcattgaagggagt
acgctacatgtctcccctgaggggctgtctgacgcgaaagggacgcttgattctccgctc
gatctctccaccgcggtcgatttgttgcctccgggcggaaaaattatcttagccgccggg
gattatccgcaaacggtgattccgctacaggccagcgggctcagagaaaaggtaaaaacg
ctgcaggccgacgacaaggcggttattcatggcctgctgctggatgcaaactactggcat
atcaagggtatctcaataacagacaagagcctgcgcatacagggcagccataacctgatc
gagaacgtcaccgcctacaaaaacgaggataccgggatccagatctcctccccggacaaa
accgatcgcccgctatgggccagctacaaccgggtcgtgaactcagaatcctacggtaat
gaggatcccggtaagattaacgccgatggtttcgccgtaaaaatgcgggtaggggaaggt
aatcgcctggaaggctgctactcacacgacaatatcgatgacggattcgacctgtttaac
aaaatcgaagacggtgccaatggcgttgtggtgatcgagaattcaattgcccgcaataac
accagtaacggttttaaactcggtggggaagggcagccggttgcccacgaaatacgtaac
agcattgctatcggtaaccatctggacgggttcactgataatttcaatcccggcaagctg
gtggtggtcaataacgtcgcggtagataaccagcgctttaactatctcttccgccccagc
ccatacggtaagccagagactcaaggcaacttcagcgacaatctgtcgctgcgcagccag
cccggaaaatatgatgatgccgttgtcgggaatattgaagataacaactactttattcgc
gggggaaaaagcgtcaatgcagaggggaaaaccattctgagcaccgattatcaaaccctg
gcgctaccggatccgctgctgcgtcatgccgatggcagttttgctaccggagactttctc
aaccgtagatag
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