Raoultella ornithinolytica B6: RORB6_19440
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Entry
RORB6_19440 CDS
T02625
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror00541
Biosynthesis of various nucleotide sugars
ror01100
Metabolic pathways
ror01250
Biosynthesis of nucleotide sugars
Module
ror_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RORB6_19440 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ror01005
]
RORB6_19440 (rfaD)
Enzymes [BR:
ror01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
RORB6_19440 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ror01005
]
Core region
RORB6_19440 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
AGJ88568
LinkDB
All DBs
Position
complement(4289484..4290464)
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AA seq
326 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFANLVDLDIADYMDKEDFLIQV
MAGEEFGEIEAIFHEGACSSTTEWDGKYMMDNNYQYSKEVLHYCLERQIPFLYASSAATY
GGRTSDFIESREYEQPLNVYGYSKFLFDEYVRQILPEADSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSDGFKRDFVYVGDVAAVNLWFWENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGSIEYIPFPEKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRETDAGSQNHSSDSKAATK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcagggtttatcggcagcaacatcgttaaggccctgaat
gacaaaggcattaccgacattttggtcgtagataatctgaaagacggcaccaagtttgct
aacctggtagacctggatatcgctgattacatggataaagaagacttcctgattcaggtg
atggccggggaagagttcggcgaaattgaagccatattccacgaaggcgcctgctcctcc
accacggagtgggacggcaagtacatgatggataacaactatcagtactccaaagaggtg
ctgcattactgcctggagcgtcagattccgttcctgtacgcctcgtcggcggcaacctac
ggcggccgcaccagcgactttatcgaatcccgtgaatatgagcagccgctgaacgtttat
ggctactccaaattcctgttcgacgaatacgtccgccagatcctgccggaagccgactcg
cagatcgttggcttccgctatttcaacgtctacgggccacgcgaagggcacaaaggcagc
atggcgagcgtggctttccacctcaacacccagttgaataacggcgaaagcccgaaactg
ttcgaaggcagcgatggcttcaaacgcgatttcgtctacgtaggcgacgtggccgcggta
aacctgtggttctgggaaaacggcgtatccggcattttcaacctcggcaccggccgtgcg
gaatctttccaggcggtagccgatgccacgctggcataccataagaaaggcagcatcgaa
tacatcccgttcccggaaaagctgaaaggccgctaccaggcatttacccaggcggatctg
accaacctgcgcgctgcgggctacgacaagccgttcaagaccgttgccgaaggcgtaacg
gaatatatggcctggctcaatcgcgaaactgacgccggttcacaaaatcattcaagcgat
agcaaggcggcaacgaagtaa
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