KEGG   Raoultella ornithinolytica B6: RORB6_21350
Entry
RORB6_21350       CDS       T02625                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ror  Raoultella ornithinolytica B6
Pathway
ror02020  Two-component system
ror02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ror00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RORB6_21350
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    RORB6_21350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ror03021]
    RORB6_21350
Transcription machinery [BR:ror03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RORB6_21350
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: AGJ88950
LinkDB
Position
complement(4699366..4700799)
AA seq 477 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHDEVETKE
VEDRESLDTVDALEQKDMPEELPLDASWDEIYTAGTPSGNGVDYQDDELPVYQGETTQSL
QDYLMWQVELTPFTDTDRAIATSIVDAVDDTGYLTIRLEDIVESIDDDDIGLEEVEAVLK
RIQRFDPVGVAAKDLRDCLLVQLSQYAKETPWLEEARLIISDHLDLLANHDFRSLMRVTR
LKEEVLKEAVNLIQSLDPRPGQSIQTSEPEYVIPDVLVRKVSGRWVVELNSDSIPRLKIN
QHYAAMGNSARNDADSQFIRSNLQEARWLIKSLESRNDTLLRVSRCIVEQQQAFFDQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTTILSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaattaaggctaagccaacagcttgccatgacgccacaactgcaa
caggctattcgcctgctgcagctgtccacgttagaactccagcaagaactccagcaggcg
ctggagagtaatccgctgcttgagcaaaccgatcttcacgatgaggtagaaaccaaagag
gtcgaggaccgcgaatcgctggacaccgtcgacgctcttgaacaaaaagatatgccggaa
gagctgccgctcgacgccagctgggatgaaatctacaccgccggcaccccgtccggaaac
ggcgttgattaccaggacgacgagctgcctgtctatcaaggcgaaacgacccaaagcctg
caggattacctgatgtggcaggttgaactgacgccgtttaccgacaccgaccgcgccatt
gccacctcgattgtcgatgccgttgatgacaccggctatctcactattcggctggaagat
attgtcgagagtatcgacgatgacgacattggtctcgaagaagtggaagcggtgctaaag
cgtatccagcgctttgacccggtcggcgtcgcggcaaaagatctgcgcgactgtctgctg
gttcagctttcccaatatgctaaagagacgccgtggctggaagaagcccggctgatcatc
agcgatcatctcgatctgctcgccaaccatgatttccgctccctgatgcgcgtcacccga
ctgaaagaagaggtgctgaaagaagccgttaatctcatccagtccctcgatccgcgcccc
ggtcagtcgattcagaccagcgagccggaatacgtcattcccgacgtgctggtacgtaag
gtcagcggccgctgggtcgtggagcttaactccgacagcatcccacgtctgaagattaat
cagcattacgcggccatgggcaatagcgcgcgcaatgatgcagacagccagtttatccgc
agcaacctgcaggaagctcgctggctgatcaagagtctggaaagccgcaatgatacgctg
ttgcgcgtcagccgctgcatcgtcgaacagcagcaggccttcttcgatcagggtgaagag
ttcatgaaaccgatggtgctggcggatatcgctcaggccgtcgaaatgcatgaatccacc
atttcacgcgttaccacccaaaaatatctgcacagtccgcgcggtatttttgagctgaaa
tatttcttctccagccacgtgaatacggaaggcggcggcgaggcatcgtcgacggccatt
cgtgcgctggtgaagaagttaatcgccgcggagaatcccgcgaagccgttgagtgacagt
aagctgaccaccatcctgtccgaacagggtatcatggtggcacgtcgtaccgtcgctaag
taccgagagtctttatccattccgccatctaaccagcgtaaacaactggtttga

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