Raoultella ornithinolytica B6: RORB6_21530
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Entry
RORB6_21530 CDS
T02625
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ror
Raoultella ornithinolytica B6
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ror03016
]
RORB6_21530 (truB)
Enzymes [BR:
ror01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RORB6_21530 (truB)
Transfer RNA biogenesis [BR:
ror03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RORB6_21530 (truB)
Prokaryotic type
RORB6_21530 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AGJ88986
LinkDB
All DBs
Position
4733456..4734400
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGASSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGLVVEERPLTFSDEQLAAALDSFRGETQ
QVPSMYSALKYQGKKLYEYARQGIDVPREARPINVYELLFIRHEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEQLQALVEQAMAQDIPAAQLLDPL
LMPMDSPASDYPLVNIPETSAVYFKNGNPVRTAGAPLQGLVRVTEGEEGKFLGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgatgtgcatggcgtgctgttgctggataaacct
cagggcgcgtccagcaacgatgtactgcagaaagtcaaacgtatctataacgcgaatcgc
gcagggcacaccggtgcgctggatccgctggcaaccggcatgctgccgatttgtctcggg
gaagccacgaagttttcccagtatctgctggattccgataagcgctatcgtgtgattgcg
aagctcggacagcgtaccgacacctctgatgccgatggcctggtggtggaagagcgcccg
ctgaccttcagcgacgaacagctggcggcggcgctggacagtttccgcggcgaaacccaa
caggtaccgtcgatgtattcggcgctgaaataccaggggaaaaagctctacgaatatgcc
cgtcaggggattgacgtcccgcgtgaagcccggccgattaacgtctatgagctgctgttt
atccgccacgaaggggatgagctggagctggaaattcactgctccaaaggcacctatatc
cggacgattattgacgatctgggtgagaaactgggctgtggcgcacacgttatttatctg
cgtcgtctggccgtcagcaaatatccggttgagcggatggtgacgctggagcagctgcag
gcgctggttgaacaggccatggcgcaggatattcctgccgcgcagctgctcgatccgctg
ctgatgccgatggacagcccggcgtcggactatcctctggttaatattcccgaaacatcg
gctgtttactttaagaatggcaacccggtccgtactgcaggcgccccgctacagggcctg
gtgcgggtcactgaaggtgaagagggtaagtttctcggtatgggtgagattgacgatgaa
ggccgcgtggcgccgcgtcgtctggttgtcgaatacccagcttga
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