Raoultella ornithinolytica B6: RORB6_22300
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Entry
RORB6_22300 CDS
T02625
Name
(GenBank) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror00260
Glycine, serine and threonine metabolism
ror00270
Cysteine and methionine metabolism
ror00450
Selenocompound metabolism
ror00670
One carbon pool by folate
ror01100
Metabolic pathways
ror01110
Biosynthesis of secondary metabolites
ror01230
Biosynthesis of amino acids
Module
ror_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RORB6_22300
00270 Cysteine and methionine metabolism
RORB6_22300
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RORB6_22300
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RORB6_22300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ror04147
]
RORB6_22300
Enzymes [BR:
ror01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
RORB6_22300
Exosome [BR:
ror04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RORB6_22300
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AGJ89140
LinkDB
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Position
complement(4893314..4894459)
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AA seq
381 aa
AA seq
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MKNLHTLSVHSGVFNDGHGAVMPPIYATSTFAQPAPGQHTGYEYSRSGNPTRHALETAIA
ELESGSRGYAFASGLAAISTVLELLDKDSHLVAVDDVYGGTWRLLENVRRHSAGLRVSWV
KPDDLVALEAAIQPDTRMIWVETPTNPLLKLADLSAIAAIARRHNIISVTDNTFASPVIH
RPLELGFDIVVHSATKYLNGHSDVVAGLAVVGDNRELAEKLGYLQNALGGVLDPFSSFLT
LRGIRTLALRMERHSSNALALAEWLEQQPQVEKVWFPWLASHPHHQLARRQMALPGGMIS
VVVKGDDIYAQQVISRLKLFTLAESLGGVESLVSQPFSMTHASIPLEQRLANGITPQLIR
LSVGIEDPQDLIADWQHALRD
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttacatacattgagcgtacacagcggcgtctttaacgatgggcacggcgcc
gttatgccgccgatttacgccacctccacctttgcccaacccgcgccggggcagcatacc
ggctatgagtattcacgcagcggcaacccgacccgccacgcgctggagacggcgattgcc
gagctggagagcggcagccgcggctacgcgtttgcttcagggctggcggcgatttccacc
gtccttgagctgctggataaagacagccatctggtggccgtcgatgatgtctacggcggg
acctggcgcctgcttgagaacgtccgccgtcacagcgcggggctgcgggtaagctgggtc
aaacccgacgatctggtcgctcttgaagccgctatccagccggatacacgcatgatctgg
gttgaaaccccgaccaacccgctgctgaagctggcggatctcagcgctatcgcggcgatt
gcccgtcggcacaatattatcagcgtcaccgataacacctttgcttcgccggtcatccac
cgccccctcgagctgggcttcgatatcgtggtccattcggcgaccaaatacctgaacggc
cactccgacgttgtcgccgggctggcggtcgtcggtgacaatcgcgaactggcggagaag
ctgggctatctgcaaaatgccctgggcggcgtacttgacccgttcagcagcttcctgacg
cttcgcggtatccggactctcgcgctgcgtatggaacgtcacagcagcaatgcgctggcc
ctcgccgaatggcttgaacagcagccgcaggtggaaaaagtctggttcccgtggctggca
tcgcatccccaccatcagctggcgcgccggcagatggcgctgccgggcgggatgatttca
gtggtggtgaaaggcgatgatatctatgcgcagcaggtcatcagcaggttgaagctgttt
actctggcagagagtctggggggcgtggagagtctggtcagccaaccgttcagcatgacc
catgcttcaattccgctggaacaacggctggccaatggcatcacgcctcagttgatccgt
ctctccgtcgggattgaagatccgcaggatctgatcgccgactggcagcacgcattgcgt
gactga
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