Raoultella ornithinolytica B6: RORB6_22360
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Entry
RORB6_22360 CDS
T02625
Name
(GenBank) P pilus assembly protein, porin PapC
KO
K07347
outer membrane usher protein
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RORB6_22360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ror02000
]
RORB6_22360
02044 Secretion system [BR:
ror02044
]
RORB6_22360
02035 Bacterial motility proteins [BR:
ror02035
]
RORB6_22360
Transporters [BR:
ror02000
]
Other transporters
Pores ion channels [TC:
1
]
RORB6_22360
Secretion system [BR:
ror02044
]
Chaperone-usher system
Type 1 pilus assembly protein
RORB6_22360
Bacterial motility proteins [BR:
ror02035
]
Pilus system
Fimbrial proteins
RORB6_22360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Big_6
Motif
Other DBs
NCBI-ProteinID:
AGJ89152
LinkDB
All DBs
Position
complement(4906239..4908773)
Genome browser
AA seq
844 aa
AA seq
DB search
MKAKTVCAMAMVHAVVIQHVAAAESDLQFNPAFLSGENENIADLSWVNARNALPPGEYNI
NVYINNNYAFTGNVKFSIDRSKGQDEALPCVTPAQIAALGIDSRQAKDEALPLARPCYFL
DALFPGARFDFDQKTLALSFSLPQSVMRNLPRGYVSQESWEYGIHAAWMNYIVNGSRNEF
RGDTRIRDRQLFASLNSGVNLGAWRLRDYTTWTKQSNKLTHVQTWLQRDIPALSAQAYVG
ETYTSAQLFDAVGLRGVTLKTDDNMLPASLSGYAPEVRGIARSNATVTVRQNGNIIYQTN
VPAGAFILKDLYPTSSGGDLSVTIQESDGSKTQYTVPFASVPNLVRSGQLKYAFNAGKFR
PVGNQDSPSFAQSELFYGWQHGLTFYGGAQLSANYRGLALGVGQNLGRFGAYSLDVTHAN
SRLANERRYSGDSLRLRYGKRLNDFGTRFNFYSLRYSTQGFYTLSDTAYKGMKGGVAKQV
VEADGSVTTRYENLYNLHLLRKAKNQLLLSQPMGGFGSLSLSWDQQTYWHTPDKTQSIQL
AWNAMFRHVAVGVSFQRSGNLFANQNENIFALSLSVPFGTPQLATRARFTTTHAGSTGAS
NSAGLSGYLPGMENVFYSVNQRYSAQQQYGADTALQYAGPWGDYNMGYSYSRDSRNLSYG
MSGGAVLHEDGLTLSQPLGNTNILIKAPGAGNVSVLNHKGIKTDSRGYAVIPYATPYRVN
QVALDVTTAGNDVELENAIVSKTPTDGALVRATMVTRQGAKALFVIRRHHEVLPFGAVVS
LADEQTSSIVGDAGSLYLPGLPLEGTLHAVWGQESGKSCSVKYRLRQQDYNPRTGLYSQE
VICQ
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagcaaaaaccgtttgcgccatggccatggtccatgccgtggtcatacagcatgtc
gccgccgcagagagcgatttgcagtttaatcctgctttcctcagcggtgagaacgagaac
atcgccgatctctcatgggtcaatgcgcggaatgcgttaccgcccggcgagtacaatatt
aatgtttatattaataacaattacgctttcaccggcaacgtgaagttcagcatcgaccgg
agcaaggggcaagacgaagccctgccctgcgtcacgccagcgcaaatagctgcgctgggt
atcgatagccgtcaggccaaagacgaagcgctgccgctggcccggccatgctatttttta
gacgcgctcttcccgggcgcccgctttgatttcgaccagaaaacgctcgccctcagtttc
agcctgccgcagagcgttatgcgtaatctgccaaggggctatgtcagccaggaaagctgg
gagtacggtatccacgccgcgtggatgaactatatcgtcaacggttccaggaatgagttt
cgcggcgacacgcggatccgcgatcgccagctcttcgccagcctgaacagcggcgtgaac
ctcggggcgtggcggctgcgcgattacaccacgtggactaaacagagcaataagcttacc
cacgtgcaaacctggctccaacgggatatccccgctctgagcgctcaggcctacgtcgga
gagacctacacttccgcacaactttttgatgccgtaggcctgcgcggcgtaacgctgaaa
acagatgacaatatgctgcccgccagcctgagtgggtacgcgccggaagttcgcggtatc
gcacggagtaatgccaccgtaaccgtacggcagaacggtaacattatttatcagacaaac
gtccccgccggggccttcatcctgaaagatctctaccccacttcatcgggcggcgattta
tccgtgaccattcaggagagcgacggcagcaaaacccagtacaccgttccgtttgccagc
gtaccgaacctggtacgttccgggcagctgaaatatgccttcaatgccgggaagtttcgt
cccgtcggcaatcaggactccccgtcgttcgcccaaagcgaactcttttacggctggcag
cacggcctcactttttacggcggcgcgcagctgtctgcaaactatcgcgggctggcgctc
ggcgtagggcaaaatctcgggcgctttggcgcctactcgctggatgtcactcacgcgaac
agcaggctggcgaacgagcgtcgctacagcggagattccctgcgcctgcgatacggcaaa
cggctcaacgactttggcacgcgctttaatttctattcgctgcgctattctactcagggg
ttctataccctcagcgatacggcctacaaagggatgaagggcggcgtagcaaaacaggtg
gtcgaggctgacggtagcgtcactacccgttatgagaatctttataacctgcatctgttg
cgcaaagcgaaaaaccagctgctgctgtcgcagccgatgggcggattcggctcgctctcg
ctgtcatgggatcagcaaacctactggcatacccctgacaagacgcaaagcatacagttg
gcgtggaatgccatgttccgtcatgtcgccgttggcgtcagttttcaacgcagcggcaac
ctgttcgctaaccagaatgaaaatatcttcgccctgtcgctctccgtcccttttggcacg
ccacagctggcgacccgcgcacgcttcaccaccacgcatgccggctcaacgggagcgagc
aatagcgctggcctcagcggctacctgcccggtatggagaatgtgttctatagcgtcaat
cagcgttacagcgcgcagcaacagtacggcgccgataccgccttacagtacgcaggtcca
tggggagactacaacatgggctatagctactcccgcgactcgcgcaacctgagctacggc
atgagcggcggcgcggttcttcatgaagatggtctgacgctgagccagccgctgggaaac
accaatattctgatcaaagcgccgggggccggcaacgtgtcggtgctcaaccataaaggc
atcaaaaccgatagccgaggctatgcggtgatcccctatgccacgccgtatcgcgtcaat
caggtggcgctggatgtcactaccgccggaaatgacgttgagctggagaacgccatcgtc
agcaaaacgccgaccgatggcgcgttggtgcgggccactatggtcacgcgccagggggct
aaagccctgttcgtcattcgtcgccaccatgaggtgctaccgtttggcgccgtggtatcg
cttgccgatgagcaaaccagcagtatcgttggcgatgccggcagcctgtatctgccgggc
ttgcctcttgaaggcacgctgcacgccgtctggggacaggaaagcggcaaaagctgcagc
gttaaatatcgtctgcgtcagcaggactataacccccgcaccggcctctattcacaggag
gtgatatgccagtaa
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