Raoultella ornithinolytica B6: RORB6_22540
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Entry
RORB6_22540 CDS
T02625
Name
(GenBank) L-arabinose-binding periplasmic protein AraF
KO
K10543
D-xylose transport system substrate-binding protein
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RORB6_22540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ror02000
]
RORB6_22540
Transporters [BR:
ror02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
RORB6_22540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AGJ89188
LinkDB
All DBs
Position
complement(4943829..4944875)
Genome browser
AA seq
348 aa
AA seq
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MNYRNIFIALATISGGISASAQAAESATVAFLMPDQASTRYEQHDFPGFKAEMSKLCAEC
KVIYQNANASATLQQQQFNSVIAQGAKIIVLDPVDSSAAAALVENAQAQDVKVIAYDRPI
PDKPADFYVSFDNEGIGYAISQSLVNHLQESGVPKGAGVLQINGSPTDAAAGLIRDGIHR
GLKASGYTTLAEFDTPEWAPPKAQEWAAGQITRFGDKIKGVVAANDGTGGGAIAAFKAAG
VQPVPPVTGNDATIAALQLIIAGDQYNTISKPSEIVAAAAAKVAVELIQGKKPQASTTLY
NTPSQLFTPAVITAKNIKAEIFDKKIQTYAQVCTGDYTAACQKLGIEK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaattaccgtaatatttttatcgcactcgcaacaatatccggcggtatttccgcgtcg
gcacaagcggccgaatccgccaccgtggcatttctcatgcccgaccaggcctccacgcgt
tatgagcagcatgatttccccggtttcaaagcggaaatgagcaaactgtgcgcagagtgt
aaggtcatttatcaaaacgctaacgccagcgcgacgctgcaacagcagcagttcaattcg
gtcattgcccagggagcgaagattatcgttctcgatccggttgactcctccgcggccgcc
gccctggtcgaaaatgcccaggctcaggatgttaaagtgatcgcttacgatcgcccgatc
cccgacaagcctgccgatttttacgtctcgtttgataacgaaggtatcggctatgcgatt
tcacaatcgttggttaatcatctgcaagagagcggcgtgccaaaaggggccggcgtcctg
cagattaatggctcgccgaccgatgccgccgcagggcttatccgcgatggtattcatcgt
gggctgaaagcgtcgggttacaccaccctcgcggagtttgatactccggaatgggcgccg
ccaaaagcgcaggagtgggccgccgggcagatcacccgcttcggggacaaaattaaaggc
gtcgtcgcggccaatgacggcaccggcggcggcgccattgccgcttttaaagccgccggc
gtacagccggttccgccggtcaccgggaacgacgcgacgattgccgcgctgcagctcatc
atcgctggcgaccagtacaacaccatctccaaaccgtcagaaatcgttgccgcggccgcg
gcgaaagtggccgtagaactcattcagggtaagaaaccgcaggcgagcaccacgctgtac
aacacgccttctcagctgtttaccccggcagtcatcaccgccaaaaatatcaaagcggaa
attttcgataaaaagatccagacctacgctcaggtgtgtaccggtgattacaccgcagcc
tgccagaaattaggtattgagaagtaa
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