KEGG   Klebsiella ornithinolytica B6: RORB6_22900
Entry
RORB6_22900       CDS       T02625                                 
Name
(GenBank) ssDNA exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ror  Klebsiella ornithinolytica B6
Pathway
ror03410  Base excision repair
ror03430  Mismatch repair
ror03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ror00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RORB6_22900
   03430 Mismatch repair
    RORB6_22900
   03440 Homologous recombination
    RORB6_22900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ror03400]
    RORB6_22900
DNA repair and recombination proteins [BR:ror03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     RORB6_22900
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     RORB6_22900
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      RORB6_22900
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 Glyco_transf_4 PEP-utilizers
Other DBs
NCBI-ProteinID: AGJ89260
LinkDB
Position
5013226..5014959
AA seq 577 aa
MKQQIQLRRREVVEGAELPADLPPLLQRLYASRGVLHAQELERSVKGMLPWTQLNGIEKA
VEMLYDAFRQERHIVVVGDFDADGATSTALSVLALRALGYSNVSYLVPNRFEDGYGLSPE
VVDQAHARGAQMIMTVDNGISSHAGVDRAHALGIPVVVTDHHLPGETLPAAEAIVNPNLR
DCDFPSKSLAGVGVAFYLMLALRTFLRDKNWFEERGITPPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNVGEARMLANELDALNQTRKEIEQGMQAEALTLCQQLERSGDTLPGGLAM
YHPQWHQGVVGILASRIKERFHRPVIAFAPTGDGLLKGSGRSIQGLHMRDALERLDTLHP
GLILKFGGHAMAAGLSLEEARFEEFQLRFGELVTEWLDPALLQGEVISDGPLETAEMSME
VAHLLREAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTS
IWPDNGVREVTLAYKLDINEFRGNRSLQLIIDHLWPV
NT seq 1734 nt   +upstreamnt  +downstreamnt
gtgaaacaacagatacaactacgccgccgtgaggtggttgaaggggctgagctccccgcc
gacctgccgccgctgctgcagcggctgtacgccagccgcggcgtcctgcatgcccaggag
ctcgaacgcagcgtcaaaggcatgctgccgtggacgcagctgaacggcatcgaaaaagcc
gttgagatgctctacgacgcattcaggcaagagcggcatatcgtcgtggtcggtgatttt
gacgccgatggcgccaccagtaccgcgctgagcgtgctggcgctgcgcgcgctgggctac
agcaatgtctcctatctggtgccaaatcgttttgaagatggctacgggttaagccccgaa
gtagtcgatcaggcccacgcccgcggggcgcagatgattatgaccgtggataacggcatc
tcttcccatgccggcgtcgatcgtgcccacgcattggggatcccggtggtcgtgaccgat
caccatctaccgggtgagacgctgccggcagcggaagccattgtgaaccccaatctgcgc
gactgcgatttcccctcgaaatcgctggccggcgtcggggtagcgttctatttgatgctg
gcgctgcgcacgttcctgcgcgataaaaactggtttgaagaacggggcatcacgccgccg
aatcttgccgaactgctggatctggtcgcgctcgggacggtggctgacgttgtgccgctg
gatgccaataaccgcattctcacctggcaagggctgagccgtatccgtgccggtaagtgc
cgtccggggatcaaagcgctgctggagattgccaaccgcgatccgcaaaagctggccgcc
agcgacctggggtttgccctgggaccgcggctgaatgcggcaggccggctggatgatatg
tcggtcggcgtggcgctgctgttgtgtgataacgtcggcgaagcgcggatgctggctaat
gaactggatgcgctgaaccagacgcgcaaagagattgagcaagggatgcaggcggaggcg
ctcacgctgtgccagcagctggaacgcagcggcgacacgctgcccggggggctggcgatg
tatcatccgcagtggcaccagggcgtggtggggattctggcgtcacggattaaagagcgt
ttccatcgcccggttatcgccttcgccccaaccggcgacgggctgttaaaaggctccggg
cgctctatccaggggttgcacatgcgcgatgcgcttgagcgccttgatacgctgcatccg
ggactgattctcaagttcggcggccatgcgatggcggcggggctgtcgctggaagaggcg
cgttttgaggagtttcagctgcgtttcggcgaactggtcaccgagtggctggatccggcg
ctgttgcagggagaagtgatctctgacggcccgctggaaacggctgagatgagcatggaa
gttgcgcatctgcttcgtgaggcgggaccctggggacagatgttcccggagccgctgttt
gacggtcgtttccgcctgttacagcagcgcctggtgggcgagcgacatcttaaagtgatg
gtcgaaccggttggcggcggcccgctgctggacgggattgccttcaacgttgatacttcg
atttggccggataacggcgtacgcgaagtcactctggcctataagctcgatattaatgag
ttccgaggcaaccgcagcctgcagcttatcattgaccatctctggccggtctga

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