Raoultella ornithinolytica B6: RORB6_23280
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Entry
RORB6_23280 CDS
T02625
Name
(GenBank) oligogalacturonide lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror00040
Pentose and glucuronate interconversions
ror01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RORB6_23280
Enzymes [BR:
ror01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
RORB6_23280
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GFIT
Motif
Pfam:
Pectate_lyase22
Tricorn_N
PD40
Motif
Other DBs
NCBI-ProteinID:
AGJ89336
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Position
complement(5090352..5091479)
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AA seq
375 aa
AA seq
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MKGKIIPLNFRTTEDSVTGRQVIRMTPPHVICHRNYFYQKCFTRDGSKLIFGGGFEGHWN
YYLLDLAAQQAVQLTDGPGDNTFGGFLSDDDRTLWYVKNNRQLRRVDLATREEQVVYTVD
DDWVAYGTWVANSDCSKLVGIEIKKSDWRPLTDWSKFRAFYFTQPECRLINIDLHSGERR
VVLQEKRWLGHPIYRPFDDQTIAFCHEGPRDAIDARMWLINADGSNMRNVRQHQPGESFT
HEFWVPDGSALYYVAHRENDPHRYLYRADPTTLDNRQLLTIPPCSHLMSNYDGSLVVGDG
APHHTGDIQLNDPFIWVFDVQSGTQRAICRHDSSWKVLDGDRQVTHPHPSFSPDDRWVLF
TSDKEGMPALYLAEV
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaaaatcatcccgctgaatttccgtaccacggaagacagcgtaaccggccgc
caggtgatccggatgacgcccccgcacgttatctgccaccgtaactacttctatcaaaag
tgctttacccgggatggcagcaaacttattttcggcggcggattcgagggccactggaac
tactatttactcgatctggccgcgcagcaggccgtacagctgaccgacgggccgggcgat
aataccttcggcggttttctatccgacgacgaccgcacgctgtggtatgtgaaaaacaat
cggcagctgcgccgcgtggatctggcgacgcgggaagagcaggtggtttacacagtggat
gacgactgggtcgcctatggtacctgggtggcaaacagcgattgcagcaaactggtcggc
atcgagataaaaaaaagcgactggcggccgctgaccgactggagtaaattccgcgccttt
tattttacccaacccgaatgccgcctgatcaatatcgacctgcatagcggcgagcgccgc
gttgtcctgcaggagaaacgctggctgggccatccgatttaccggccgtttgatgaccag
accatcgcgttctgccacgaaggaccgcgcgatgctatcgacgccaggatgtggcttatc
aacgctgacggcagcaatatgcgcaacgttcgccagcaccaaccgggagagagtttcacc
catgagttctgggtgccggatggctccgcgctctattacgtcgcccaccgggaaaacgat
ccgcatcgctatctctaccgtgccgaccccaccaccctggataatcgtcagctgctgacc
attcctccctgctcgcacctgatgagtaactacgatggttcgctggtcgtcggcgatggc
gcaccgcatcataccggcgatattcagctgaacgatccgtttatctgggtatttgacgtg
cagtccggtacgcagcgggccatttgtcgccacgactccagctggaaagtgctcgacggc
gatcgtcaggtcacccacccccatccgtcattttcgccggatgaccgctgggtgctgttt
acctccgataaagaagggatgccggcgctgtacctggcggaggtgtag
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