Raoultella ornithinolytica B6: RORB6_24305
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Entry
RORB6_24305 CDS
T02625
Name
(GenBank) Dipeptide-binding ABC transporter, periplasmic substrate-binding component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RORB6_24305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ror02000
]
RORB6_24305
Transporters [BR:
ror02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RORB6_24305
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
OpuAC
DUF5818
Motif
Other DBs
NCBI-ProteinID:
AGJ89541
LinkDB
All DBs
Position
complement(5322111..5323673)
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AA seq
520 aa
AA seq
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MNMSRTSFTGFRPLLLAVALAAAIAPAYAAVPKDMLVIGKAADPQTLDPAVTIDNNDWTV
TYPAYQRLVKYKTQDGKGSTDVEGDLAESWQVSDDGKTWTFSLHKNMQFDDGTPVTAEAV
KLSFERLMRIKQGPSEAFPSGLKIEAVDPATVRFILPDSFAPFLHTLANDGASIVNPAVL
KANAADDARAWLAEHTAGSGAYMLQRWQKGQQLVLVPNPHFSGTKPTFKRVTVKIIGESA
ARRLQLTKGDLDIADALPVDQFAALKKQDSVAVYDYPALRVTYLYLNNSKAPMNQVDLRR
AVSWATDYQGMVNGILGGNGKQMRGPIPDGMWGFDPSAMQYSLDMDKAKAALANVADKPK
TLSFLYSDNDPNWEPIALSTQANLQTLGIQVKLEKLANATMRERIGKGDYDIAIGNWSPD
FADPYMFMNYWFESDKKGLPGNRSFYANPQVDALLKQAVATTDQTERTRDYQAAQKTVID
EAAYVYLFQKNYQVAMNKEVKGFVFNPMLEQIFNIADMHK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgagtcgcacctcttttaccggttttcgcccgctgctgttggccgttgcgctg
gcagcggctatcgccccggcttatgctgccgtgcccaaagatatgctggtcatcggtaaa
gccgccgatccgcagacgctcgacccggccgtcactattgataataacgactggacggtc
acctacccggcctatcagcggctggtcaaatacaaaacccaggacgggaaaggctcaacg
gacgtcgagggcgacctggccgaaagctggcaggtctctgatgacggtaaaacctggacc
ttttcactgcacaaaaacatgcagtttgacgacggcacgccggtcaccgccgaagcggta
aaactctctttcgaacgcctgatgcgcattaagcaaggtccttcggaagccttcccgagc
gggctgaaaattgaggccgtggatcccgccacggtgcgcttcatcctgccggactcgttc
gctccgttcctccacaccctggccaatgatggcgcgtcgatcgtcaacccggcggtcctg
aaggccaacgccgccgatgacgcccgcgcctggctggcggaacacaccgccggctcggga
gcctatatgctgcagcgctggcagaaaggccagcagctggtgctggtgcccaacccgcac
ttcagcggcacgaagccgacctttaaacgcgtgacggtgaagattattggtgaaagcgcc
gcccgccgtctgcagctgaccaagggcgatctggatattgccgatgcgctgccggtcgac
cagtttgcggccctgaagaagcaggatagcgtggcggtgtatgactatccggcgctacgc
gtgacctacctgtatctcaacaacagcaaagcgccgatgaatcaggtcgatttacgccgc
gccgtctcctgggccaccgattatcaagggatggtcaacggcattctcggcggcaacggc
aaacagatgcgcggcccaatccccgacggtatgtggggctttgacccgagcgcgatgcag
tattcccttgatatggataaagccaaagccgcgctggccaacgtcgccgataagccaaaa
accctgtcgttcctctactccgataacgacccgaactgggagccgattgcgctctccacc
caggcaaatctgcaaaccctcggcatccaggtgaagctggaaaaactggctaacgccacc
atgcgcgagcgcattggtaaaggggattacgatatcgctatcggcaactggagcccggat
ttcgccgacccctatatgttcatgaactactggttcgagtcagataaaaaagggctgccg
ggcaaccgttcgttctatgccaacccgcaggttgacgcgctgctcaaacaggccgtcgcc
actaccgaccagacagaacgcacccgggattatcaggcggcgcagaaaaccgttatcgat
gaggccgcctacgtctatctgttccagaagaactaccaggtggcgatgaataaagaggtc
aagggcttcgtcttcaacccgatgcttgagcagattttcaatattgccgatatgcacaaa
tag
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