Roseomonas sp. FDAARGOS_362: CTJ15_03980
Help
Entry
CTJ15_03980 CDS
T05160
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ros
Roseomonas sp. FDAARGOS_362
Pathway
ros00521
Streptomycin biosynthesis
ros00523
Polyketide sugar unit biosynthesis
ros00525
Acarbose and validamycin biosynthesis
ros00541
Biosynthesis of various nucleotide sugars
ros01055
Biosynthesis of vancomycin group antibiotics
ros01100
Metabolic pathways
ros01110
Biosynthesis of secondary metabolites
ros01250
Biosynthesis of nucleotide sugars
Module
ros_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ros00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CTJ15_03980 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CTJ15_03980 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CTJ15_03980 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CTJ15_03980 (rfbB)
00525 Acarbose and validamycin biosynthesis
CTJ15_03980 (rfbB)
Enzymes [BR:
ros01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CTJ15_03980 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
NAD_binding_10
NAD_binding_8
CBD_PlyG
Motif
Other DBs
NCBI-ProteinID:
ATR19529
UniProt:
A0A2D2H0N5
LinkDB
All DBs
Position
unnamed4:complement(53407..54465)
Genome browser
AA seq
352 aa
AA seq
DB search
MAKKFLVTGGAGFIGSAVARRLIRETPHHVLVVDKLTYAGNLASLAPVADDPRFRFLRAD
IADAAAMRAAMAEFRPEVVMHLAAESHVDRSIDGPGEFVQTNVVGTFTLLQAALEHWRSL
PPGAERDGFRFHHVSTDEVFGSLGEDGLFREDTPYDPRSPYSASKAASDHFVRAWHHTYG
LPVVVTNCSNNYGPYHFPEKLIPLTILNALEGRPLPVYGRGENVRDWLYVEDHAAALVLV
AERGVPGESYNIGGHNERRNIEVVRAICALLDEMAPGPGAPRESLITFVTDRPGHDLRYA
IDAGKIGRELGWRPAESFESGLRRTVRWYLDNRGWWEAVRSGAYRGERLGLG
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaattccttgtcacgggcggtgcgggcttcatcggatcggcggtggcacgg
cggctgatccgcgagacgccgcaccacgtgctggtggtggacaagctgacctatgcgggc
aacctcgcctcgctggcgccggtggcggacgacccgcgcttccgcttcctgcgggccgat
atcgccgatgccgcggcgatgcgcgcggccatggcggagttccgccccgaggtggtgatg
cacctcgccgccgagagccatgtggaccgctccatcgacgggccgggcgagttcgtgcag
accaatgtggtgggcacattcaccctgttgcaggcggcgctggaacactggcgcagcctg
ccgccgggcgcggagcgggacggcttccgcttccaccatgtctcgaccgacgaggtcttc
ggctcgctgggcgaggatggcctgttccgcgaggacacgccctatgacccgcgctcgccc
tattcggcctccaaggcagcctcggaccatttcgtgcgggcttggcaccacacctacggg
ttgccggtggtggtgaccaactgctccaacaactacggcccctaccacttccccgagaag
ctgatcccgctcaccatcctcaacgcgctggagggtcggcccctgccggtctatgggcgc
ggcgagaatgtgcgggactggctctatgtcgaggaccatgccgcggcgctggtcctggtg
gcggagcgtggcgtgccgggcgagagctacaacatcggcggccataacgagcggcgcaac
atcgaggtggtgcgcgccatctgcgccctgctggacgagatggcgccgggccccggcgcg
ccgcgcgagagcctgatcaccttcgtcaccgaccggccgggccatgacctgcgctatgcc
atcgatgccgggaagatcgggcgcgagctgggctggcgcccggccgagagcttcgagagc
gggctgcgccgcacggtacgctggtatctcgacaaccgcggctggtgggaggccgtgcgc
tccggcgcctatcgcggcgaaaggctaggcctaggctga
DBGET
integrated database retrieval system