KEGG   Roseomonas sp. FDAARGOS_362: CTJ15_04390
Entry
CTJ15_04390       CDS       T05160                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
ros  Roseomonas sp. FDAARGOS_362
Brite
KEGG Orthology (KO) [BR:ros00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ros03032]
    CTJ15_04390
   03036 Chromosome and associated proteins [BR:ros03036]
    CTJ15_04390
   03400 DNA repair and recombination proteins [BR:ros03400]
    CTJ15_04390
DNA replication proteins [BR:ros03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CTJ15_04390
Chromosome and associated proteins [BR:ros03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CTJ15_04390
DNA repair and recombination proteins [BR:ros03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CTJ15_04390
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: ATR19670
UniProt: A0A2D2H0W7
LinkDB
Position
unnamed3:76298..76612
AA seq 104 aa
MSKKFIADVIQQSSDLTGLASVRLAGAVIEAIKAEIVETGRFSLPEFGSFSVRETPKRTK
MNPRTGEKVQVKAGATVRFKPSPNLKEAVFAGVKKARRKAAKAG
NT seq 315 nt   +upstreamnt  +downstreamnt
atgtcaaagaagttcatcgctgacgtgattcagcaatcctccgatctgaccggcctggcc
tcggtgcggctggcgggtgcggtgatcgaggccatcaaggccgagatcgtcgagaccggt
cgcttctcgctgccggagttcggctccttctcggtgcgagaaaccccgaagcggaccaag
atgaacccgcgcaccggcgagaaggtccaggtcaaggccggcgcgacggtgaggttcaag
ccgtcgccgaacctgaaggaggcggtgttcgccggcgtgaagaaggcccgccgcaaggcc
gccaaggccggctga

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