Roseomonas sp. FDAARGOS_362: CTJ15_09525
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Entry
CTJ15_09525 CDS
T05160
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ros
Roseomonas sp. FDAARGOS_362
Brite
KEGG Orthology (KO) [BR:
ros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ros03032
]
CTJ15_09525
03400 DNA repair and recombination proteins [BR:
ros03400
]
CTJ15_09525
Enzymes [BR:
ros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CTJ15_09525
DNA replication proteins [BR:
ros03032
]
Prokaryotic type
DNA Topoisomerases
CTJ15_09525
DNA repair and recombination proteins [BR:
ros03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CTJ15_09525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
ATR20522
LinkDB
All DBs
Position
1017852..1020590
Genome browser
AA seq
912 aa
AA seq
DB search
MTDVVVVESPAKAKTINKYLGGGYKVIASFGHVRDLPAKDGSVRPEEGFAMDWESEERGE
RQLREIASALKGAKRLFLATDPDREGEAISWHVREMLEKKRLLKGLEVHRVTFNEITKRA
VQYAIDHPRDLDTPLIEAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLICE
REAEIEVFRPREYWTVETRFATPIGAHFTARLTHLDGRRLEQFDLPDEAAAKRAVAAIEA
GEFSVASVEKKRVRRNPQAPFTTSTLQQEASRKLGFGAQATMRLAQQLYEGVEIGGETVG
LITYMRTDGVQMSAEAIQAIRGHVGEEFGQNYLPPQAREYSSRAKNAQEAHEAIRPTDVQ
RTPMQVARYLNPDQRRLYDLVWKRAVASQMASAELDQTTVEIAEGTGRTKLRATGSVIAF
DGFLKLYREDVDDAPAAALGDEDGRVLPPMAERDALKRGEVTPEQHFTQPPPRYSEASLV
KKMEELGIGRPSTYASILQTLQDRSYVKLEKRRFQPEDRGRLVTAFLVAFFERYVDTNFT
AALEEKLDDISGGRADWREVMAEFWDAFSKAVAATKDLKISDVIDALDEDLGPHFFPPAD
DGKDPRECPNCHTGRLGLRLGKTGAFIGCSNYPECRYTRPLIAPGAEGDEAAGFADGVRE
LGTSPDGLPVTMRRGPYGIYVQLGEPGVDEKGKPTKPRRASLTRGMEPEGVTLERALALL
SMPRIVGVHPETGEEITAHLGRFGPYLTMGTLSKSLDKDDDVLTIGLNRAVALLADAKPR
SVVLGEHPKDGVPVEIRRGRFGPYAQHGQIVASLPRNVQAEDFTLEQAVALLAEKGKPLP
AKGGKGGAKGKAKAGAKKAAAKPAAGDGEAKPAAKAPATKKAAPRKAAGKTVAKAAAGKP
TAKPAARKTAKV
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtcgtcgtcgtagaatcccccgccaaggccaagaccatcaacaagtacctg
ggtggcggctacaaggtcatcgcctccttcggccatgtgcgcgacctgcccgccaaggac
ggttccgtgcggcccgaggaaggcttcgccatggactgggagtccgaggagcgcggggag
cggcagctgcgcgagatcgcctcggcgctgaagggggccaagcggctcttcctcgccacc
gacccggaccgcgagggcgaggccatctcctggcatgtgcgggagatgctggagaagaag
cggctgctgaagggcctcgaggtccaccgcgtcaccttcaacgagatcaccaagcgcgcc
gtccagtacgccatcgaccatccacgcgacctggatacgccgctgatcgaggcctatctg
gcccggcgcgcgctcgactacctcgtgggcttcacgctgtcccccgtgctctggcgcaag
ctgccgggcagccgctcggccgggcgggtgcagtcggtcgcgctgcgcctgatctgcgag
cgcgaggcggagatcgaggtcttcaggccacgcgagtactggacggtggagacgcgcttc
gccacgccgatcggggcgcatttcaccgcgcggctgacgcatctggacggcaggcggctg
gagcagttcgacctgccggacgaggccgccgcgaagcgcgccgtcgccgccatcgaggcg
ggtgagttcagcgtcgcctcggtcgagaagaagcgggtccgccgcaatccgcaggcgccc
ttcaccacctcgaccctgcagcaggaggcctcgcgcaagctgggcttcggtgcccaagcg
acgatgcgcctggcgcagcagctctacgagggcgtggagatcggcggcgagacggtcggc
ctgatcacctatatgcggaccgacggcgtgcagatgtcggccgaggcgatccaggccatc
cgcggccatgtcggcgaggaattcggccagaactacctgccgccgcaggcccgcgaatat
tcctcccgcgccaagaacgcccaggaggcgcacgaggcgatccgcccgaccgacgtgcag
cgcaccccgatgcaggtggcacgctacctgaacccggaccagcgccgtctctacgacctg
gtctggaagcgcgccgtggccagccagatggcctcggcggagctggaccagaccacggtg
gagatcgccgagggcacgggccggacgaagctgcgcgccaccggctcggtgatcgccttc
gacggcttcctgaagctgtaccgcgaggatgtggacgacgcccccgccgccgccctcggc
gatgaggatggccgcgtgctgccgccgatggcggagcgggacgcgctgaagcgcggtgag
gtcacgccggagcagcatttcacccagccgccgccgcgctattccgaggcttccctggtg
aagaagatggaggagctcggcatcggccgcccctccacctatgcctccatcctgcagacg
ctgcaggaccgcagctatgtgaagctggagaagcgccgcttccagccggaggatcgcggc
cgcctcgtcaccgccttcctggtggccttcttcgagcgctacgtggacaccaacttcacc
gccgcgctggaggagaagctcgacgacatcagcggcggccgcgccgactggcgggaggtc
atggccgagttctgggacgccttctccaaggccgtggccgcgaccaaggacctcaagatc
agcgacgtgatcgacgcgctggacgaggatctggggccgcacttcttcccgccggccgac
gacggcaaggacccgcgcgaatgcccgaactgccataccgggcggctcgggctgcggctg
ggcaagacgggcgccttcatcggctgctccaactacccggaatgccgctacacccgcccg
ctgatcgcccccggcgccgagggcgacgaggcggcgggcttcgccgacggcgtgcgtgag
ctgggcacgagcccggacgggctgccggttaccatgcggcgcggaccctatggcatctat
gtccagctcggcgagccgggggtggacgagaagggcaagccgaccaagccgcgccgcgcc
agcctgacccggggcatggaaccggaaggggtgacgctggaacgcgccctcgccctgctg
tccatgccgcgcatcgtcggggtgcatcccgagacgggcgaggagatcaccgcccatctc
ggacgtttcggcccctatctgaccatgggcacgctgtccaagtcgctcgacaaggacgat
gacgtgctgaccatcggcctgaaccgggccgtggcgctgctggccgacgccaagccacgt
tccgtggtgctgggcgagcacccgaaggacggcgtgccggtcgagatccgccgcggccgc
ttcggcccctatgcccagcatggccagatcgtggccagcctgccccgcaacgtccaggcg
gaggatttcaccctggaacaggcggtggcgctgctggccgagaagggcaagccgcttccc
gccaagggaggcaagggcggagccaaaggcaaggccaaggccggggcgaagaaggcggcc
gcgaaacccgccgccggcgacggggaggcgaagcccgccgccaaggcccccgccacgaag
aaggccgcgccgcgcaaggcggccggcaagacggtggccaaggccgccgccggcaagccc
acggccaagccggcggcgcgcaagaccgccaaggtctga
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