Roseomonas sp. FDAARGOS_362: CTJ15_11785
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Entry
CTJ15_11785 CDS
T05160
Name
(GenBank) ATP-dependent helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ros
Roseomonas sp. FDAARGOS_362
Pathway
ros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTJ15_11785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ros03019
]
CTJ15_11785
Enzymes [BR:
ros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CTJ15_11785
Messenger RNA biogenesis [BR:
ros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CTJ15_11785
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
NACHT
Motif
Other DBs
NCBI-ProteinID:
ATR20911
UniProt:
A0A2D2H4G4
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All DBs
Position
1485883..1487295
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AA seq
470 aa
AA seq
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MTDFLTLGLASPILRALDEEGYTTPTPIQAQAIPAAMEGRDVLGIAQTGTGKTAAFALPL
LHRLIMDKRRAPPTGCRALILSPTRELAAQIHDSIKAYGRHLGLRSALIFGGVPENPQRR
ALSGGVDIIVATPGRLLDHIGTRNCRLDSLEAFILDEADQMLDRGFWPAIRRISGMLPKQ
RHTMFFSATMPEAIASLAKDLLREPVKVEVTPVATTAERVNQRAIHVSRDGKRTVLADIL
RKPEVGRTLVFSRTKHGADRIVKQLEQDGLAANAIHGNKSQGQRERALDAFKRGTAPILV
ATDIAARGIDVSGVTHVIQYDLPEVPETYVHRIGRTARAGASGEAIALVSLDDVPLLRAV
EKLTRQAVPAEGDIPTGPVPRAPGRQQNRGRGGQGRPGGAPRPAGGHGAGGHGRGDARRP
QFAGDRKPSGGRPQGEGRDRRADHARHEGEAKNRSWRDSDFRDTDRSGTR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttcctgaccctcggcctcgcgtcgcccatcctgcgcgcgctggacgaagag
ggctacaccaccccgaccccgatccaggcccaggccatcccggccgccatggaagggcgg
gacgtgctgggcatcgcccagaccggcactggcaagaccgcggccttcgcgctgccgctg
ctgcaccgcctgatcatggacaagcgccgtgccccgccgaccggctgccgcgcgctgatc
ctgtcgccgacgcgggaactggcggcgcagatccatgacagcatcaaggcctatggccgc
cacctgggcctgcgcagcgcgctgatcttcggcggcgtgccggagaacccgcagcgccgc
gcgctgtcgggcggcgtggacatcatcgtcgccacgccgggccgcctgctggaccatatc
ggcacgcgcaactgccgcctggactcgctggaggccttcatcctcgacgaggccgaccag
atgctggaccggggcttctggcccgcgatccgccgcatctcggggatgctgccgaagcag
cgccacacgatgttcttctcggccaccatgccggaggccatcgcctcgctcgccaaggac
ctgctgcgcgagccggtgaaggtcgaggtcacgcccgtcgccaccaccgcggagcgggtg
aaccagcgcgccatccatgtgagccgcgacggcaagcgcacggtgctggccgacatcctc
cgcaagccggaagtgggccgcaccctggtcttctcccgcaccaagcacggcgctgaccgc
atcgtgaagcagttggagcaggacgggctcgccgccaacgcgatccatggcaacaagagc
cagggccagcgtgagcgcgcgctcgacgccttcaagcgcggcacggcgccgatcctggtc
gcgaccgacatcgccgcgcgcggcatcgacgtgtccggcgtgacgcatgtgatccagtac
gacctgccggaagtgccggagacctatgtccaccgcatcggccgcaccgcgcgcgccggc
gcctcgggcgaggccatcgccctggtgtcgctggacgacgtgccgctgctgcgcgcggtc
gagaagctgacgcgccaggcggttccggccgagggcgacatcccgaccggcccggtgccg
cgcgcgcccgggcgccagcagaaccgtggccgtggcggccagggccgccccggcggcgcg
ccccgaccggcgggtgggcacggcgccggcggccacggccgcggcgatgcccgccgcccg
cagttcgcgggtgaccgcaagccgtcgggcggccgcccgcagggcgagggccgcgaccgt
cgcgccgatcacgcgcgccacgagggcgaggccaagaaccgttcctggcgggacagcgac
ttccgcgacacggaccgttccggcacgcgctga
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