Roseomonas sp. FDAARGOS_362: CTJ15_12370
Help
Entry
CTJ15_12370 CDS
T05160
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ros
Roseomonas sp. FDAARGOS_362
Pathway
ros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTJ15_12370 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ros03019
]
CTJ15_12370 (pnp)
03016 Transfer RNA biogenesis [BR:
ros03016
]
CTJ15_12370 (pnp)
Enzymes [BR:
ros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CTJ15_12370 (pnp)
Messenger RNA biogenesis [BR:
ros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CTJ15_12370 (pnp)
Transfer RNA biogenesis [BR:
ros03016
]
Prokaryotic type
tRNA degradation factors
CTJ15_12370 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
Motif
Other DBs
NCBI-ProteinID:
ATR21014
LinkDB
All DBs
Position
1605642..1607861
Genome browser
AA seq
739 aa
AA seq
DB search
MFDHYYRKDIAWGGKTLTLETGKVARQADGAVMARLGDTIVLCTAVGSRSVKPGQDFFPL
TVNYQEKAFAAGKIPGGFFKREGRPSESETLISRLIDRPIRPLFPEGFRNEVQVIATVLS
HDMENDPDMVAMVGCSAALTLSGIPFFGPVASARVGYIDGQYVLNPTLEERKRSQLDLVV
AGTAEGVLMVESEAQELSEEVMLGAVEFGHRGFQPVIQGIIELAEHAAKEPWPLAEADEG
LAALKARIAGLGRDKMAEAYKETQKLLRQGKVGEVKKEVLAALEAEGLDVAAAKGLLKDL
EADVVRNAILDTGIRIDGRDTRTVRPIMAEVGVLPRAHGSALFTRGETQALAVATLGTGQ
DEQIIDQLAGEYRENFLLHYNFPPYSVNETGRMGSPGRREVGHGKLAWRAIHPLLPEKEK
FPYTMRVVSEITESNGSSSMATVCGTSLSLMDAGVPLKRPCAGIAMGLIKEDRGFAVLSD
ILGDEDHLGDMDFKVAGTEQGVTALQMDIKITSITFDIMKTALEQARDGRIHILGEMAKG
LSGARTDVSANAPKVTIINVPKDKIREVIGTGGKVIREIVEQTGTKIDIEDDGTIKIASS
SPEATQAAIDRIKGITAEAEIGTIYNGTVVKTADFGAFVNFLGAKDGLVHISELSQDRVN
KTTDIVNVGDKVKVKVIGFDDRGKVKLSMRVVDQATGADITEQVGARRPRPEGEEGGEGR
RDRGDRGDRGRGPRRDFRD
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaccactactaccgcaaggacatcgcctggggcggcaagaccctgacgctggag
acgggcaaggtggcccgccaggccgatggcgccgtgatggcccgcctgggcgataccatc
gtgctctgcacggcggtcggtagccgttcggtcaagcccgggcaggacttcttcccgctg
accgtcaactaccaggagaaggctttcgccgcgggcaagatccctggcggcttcttcaag
cgcgagggtcgtccctccgagagcgagacgctgatctcgcgcctcatcgaccggccgatc
cgcccgctcttccccgaaggcttccgcaacgaggtccaggtcatcgcgacggtgctgtcg
catgacatggagaacgacccggacatggtggcgatggtcggttgctccgccgccctgacg
ctgtccggcattcccttcttcggcccggtggcctcggcgcgcgtcggctatatcgacggc
cagtacgtgctgaacccgacgctggaggagcgcaagcgctcgcaactcgacctcgtggtc
gccggcaccgccgagggcgtgctgatggtggagtccgaggcacaggagctctccgaggag
gtgatgctcggcgccgtggaattcggccaccggggcttccagcccgtgatccagggcatc
atcgagctggccgagcatgccgccaaggagccctggccgctggccgaggccgatgagggc
ctggcggcgctcaaggcccgcatcgccgggctgggccgcgacaagatggccgaggcctac
aaggagacgcagaagcttctccgccagggcaaggtcggcgaggtcaagaaggaggtcctg
gcggcgctggaggccgagggcctcgacgtggccgctgccaagggtctgctcaaggacctg
gaggcggacgtggtccgcaacgcgatcctcgacacgggcatccgcatcgacggccgcgac
acccgcaccgtccgcccgatcatggccgaggtcggcgtgctgccgcgcgcccatggctct
gcccttttcacccgtggcgagacccaggcgctcgccgtggcgacgctgggcaccgggcag
gacgagcagatcatcgaccagctcgccggcgagtaccgcgagaacttcctgctgcactac
aacttccccccctactcggtgaacgagacgggccgcatgggctcgccggggcggcgtgag
gtcggccatggcaagctcgcctggcgcgccatccacccgctcctgccggagaaggagaag
ttcccgtacacgatgcgcgtggtctccgagatcacggagtcgaacggctcctcctccatg
gccaccgtctgcggcacctccctgtcgctgatggatgcgggcgtgccgctgaagcgcccc
tgtgccggcatcgccatgggcctgatcaaggaggatcgcggcttcgccgtgctctccgac
atcctgggcgacgaggaccacctcggcgacatggacttcaaggtggccggcaccgagcag
ggcgtgaccgcgttgcagatggacatcaagatcacgtccatcaccttcgacatcatgaag
accgccctggagcaggcccgtgacggccgcatccacatcctgggcgagatggcgaagggc
ctgtccggcgcccgcaccgacgtctcggccaatgcccccaaggtcacgatcatcaacgtg
cccaaggacaagatccgcgaagtgatcggcacgggcggcaaggtgatccgcgagatcgtc
gagcagaccggcaccaagatcgacatcgaggacgatgggacgatcaagatcgcctcgtcc
agcccggaggcgacccaggccgcgatcgaccgcatcaagggcatcaccgccgaggccgag
atcggcacgatctacaacggcaccgtggtgaagaccgccgatttcggcgccttcgtgaac
ttcctcggcgccaaggacggccttgtccacatctccgagctgtcgcaggaccgggtcaac
aagaccaccgacatcgtcaacgtgggcgacaaggtgaaggtcaaggtcatcggtttcgac
gaccgcggcaaggtgaagctgtccatgcgggtggtcgatcaggcgaccggcgcggacatc
accgagcaggtcggcgcccgccgcccccgccccgagggcgaggaaggtggagagggccgc
cgcgaccgtggggaccggggcgaccggggccgtggcccgcggcgcgacttccgcgactga
DBGET
integrated database retrieval system
