KEGG   Roseomonas sp. FDAARGOS_362: CTJ15_22305
Entry
CTJ15_22305       CDS       T05160                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
ros  Roseomonas sp. FDAARGOS_362
Pathway
ros03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ros00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CTJ15_22305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ros03400]
    CTJ15_22305
DNA repair and recombination proteins [BR:ros03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CTJ15_22305
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CTJ15_22305
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H AAA_22 AAA_16 SKA3_helical Kinesin DUF87 Microtub_bd DUF8262
Other DBs
NCBI-ProteinID: ATR23257
LinkDB
Position
complement(3913406..3915604)
AA seq 732 aa
MTAPAPILFQPPKRPATEPQKPLRVESPYQPAGDQPAAIADLVAGLRQGERDQVLLGVTG
SGKTFTMAKVIESVQRPTLILAPNKTLAAQLYGEMKSFFPDNAVEYFVSYYDYYQPEAYV
PRTDTYIEKDSAINEQIDRMRHSATQALLERGDVVIVSSVSCIYGIGSVETYGNMTVRLE
QGGRIARETLLKALVELQYRRNDAAFARGTFRVRGETVDVWPSHMEDRAWRISLFGDEVD
GLREFDPLTGEVSGEMERIAIYANSHYVTPRPTLIQAIRQIKTELKQRLAELNDAGRLLE
AQRLEQRTTFDIEMLETTGVCKGIENYSRYLSGRGPGEPPPTLFEYLPANALLVVDESHV
TVPQIGGMYRGDFARKTILAEHGFRLPSCMDNRPLKFEEWDTFRPPSLFVSATPGPWEME
RTAGTFAEQVIRPTGLIDPVCEIRPVEGQVDDLLAECRIIRDKGGRVLVTTLTKRMAEDL
TEYMTETGIKCRYLHSDVDTLERIEIIRDLRKGVFDVLIGINLLREGLDIPECALVAILD
ADKEGFLRSTTSLIQTIGRAARNAEGRVILYADRMTNSLNNALGETERRRAKQMAYNEEH
GITPQTIRRDISDVLQSVYEQDYVTVEAVEGSETAEFVGKDLRASIAELERRMRAAAADL
EFETAARLRDEIKRLEAMELGLDAGPVTHAKDIRAKGDWRPKPLGPGGGGYDPKKTTRGG
RSRGQRAAARKG
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgaccgcccccgcccccatcctgttccagccgccgaagcgcccggccaccgagccgcag
aagccgctgcgggtggaatccccctaccagcccgccggcgaccagcccgccgccatcgcc
gacctcgtcgccggcctgcggcagggggagcgcgaccaggtcctgctcggcgtcaccggc
tcgggcaagaccttcaccatggccaaggtcatcgaatccgtgcagcgcccgaccctgatc
ctggcgcccaacaagaccctcgcggcccagctctatggggagatgaagtccttcttcccc
gacaacgcggtggaatacttcgtctcctactacgactactaccagccggaagcctatgtc
ccgcgcaccgacacctatatcgagaaggattccgcgatcaacgagcagatcgaccgcatg
cgccacagcgccacacaggcgctgctggaacgcggcgacgtcgtgatcgtctcctccgtc
tcctgcatctacggcatcggctcggtcgagacctacggcaacatgaccgtgcgcctcgaa
cagggcggccgcatcgcgcgcgagactctgctcaaggcgctggtggaactccagtaccgc
cgcaacgacgccgccttcgcccgcggcaccttccgcgtgcgcggcgagacggtggatgtc
tggccctcccacatggaggaccgggcctggcgcatctccctcttcggcgacgaggtggac
gggctgcgcgagttcgacccgctgaccggcgaggtttccggcgagatggagcgcatcgcc
atctacgccaactcgcactacgtcaccccgcgcccaacgctcatccaggcgatcaggcag
atcaagacggaactcaagcagcgcctcgccgagctcaacgacgccggccggctgctggag
gcccagcgcctggaacagcgcaccaccttcgacatcgagatgctagagaccaccggcgtc
tgcaagggcatcgagaactactcccgctacctctccggccgcggccccggcgagccgccg
ccgaccctcttcgagtacctgcccgccaacgccctcctcgtcgtcgatgaaagccacgtc
accgtgccgcagatcggcggcatgtaccggggcgacttcgcgcgcaaaaccatcctggcc
gagcacggcttccgcctgccctcctgcatggacaaccgccccctgaagttcgaggagtgg
gacaccttccgtccccccagcctcttcgtctccgccacccccggcccctgggagatggag
cgcaccgccggcaccttcgccgagcaggtgatccgccccaccggcctgatcgacccggtc
tgcgagatccgccccgtcgaaggccaggtggacgacctcctcgccgaatgccgcatcatc
cgcgacaagggcggccgcgtcctcgtcaccacgctcaccaagcgcatggccgaggatctc
accgagtacatgacggagaccggcatcaagtgccgctacctgcactcggacgtggacacg
ctggagcgcatcgagatcatccgtgatctccgcaagggcgtcttcgacgtgctgatcggc
atcaacctgctgcgcgagggcctggacatccccgaatgcgcccttgtcgccatcctcgac
gccgacaaggaaggcttcctccgctccaccacctcgctgatccagaccatcggccgcgcc
gcccgcaacgccgaaggccgcgtcatcctctatgccgaccggatgaccaacagcctgaac
aacgcgctgggcgagaccgagcggcgccgcgccaagcagatggcctacaacgaggaacac
ggcatcacgccgcagaccatccgccgcgacatctccgacgtgctgcaatccgtttacgag
caggactacgtcacggtggaggcggtcgaaggctccgagacggcggaattcgtcggcaag
gacctccgcgcctcgatcgccgagctcgaacgccgcatgcgcgccgccgccgccgacctg
gaattcgagaccgccgcccgcctgcgcgacgagatcaagcgcctcgaagccatggagctc
ggcctcgacgccggccccgtcacccacgccaaggacatccgcgccaagggcgactggcgc
cccaagcccctcggccccggcggcggcggctacgatcccaagaagaccacccgcggcggc
cgctcccgcggccagcgtgccgccgcccgcaagggctga

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