KEGG   Roseomonas sp. FDAARGOS_362: CTJ15_22940
Entry
CTJ15_22940       CDS       T05160                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ros  Roseomonas sp. FDAARGOS_362
Pathway
ros03420  Nucleotide excision repair
ros03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ros00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CTJ15_22940
   03430 Mismatch repair
    CTJ15_22940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ros03400]
    CTJ15_22940
Enzymes [BR:ros01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CTJ15_22940
DNA repair and recombination proteins [BR:ros03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CTJ15_22940
   MMR (mismatch excision repair)
    Other MMR factors
     CTJ15_22940
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 AAA_30 UvrD_C_2 PcrA_UvrD_tudor AAA_11 AAA_22
Other DBs
NCBI-ProteinID: ATR23269
LinkDB
Position
4032316..4034559
AA seq 747 aa
MPATGGGLRNLPEPDYLGKLNPEQRAAVETVDGPLLVLAGAGTGKTRVLTTRFAHILMTR
KAFPNQVLAVTFTNKAAREMRERVSHILGRPAEGLWLGTFHALCARMLRRHAEYVRLTSS
FTILDTDDQLRLLKQVMEAAGGIDQKRWPAQGLMAVIQRWKDRGLTPERVTPAEDSDFAN
GRARQLYEAYQSRLRDLNTVDFGDLLLHMTEILRTQPDVLAQYHRSFRYILVDEYQDTNT
VQYLWLRLLAQGHRNICCVGDDDQSIYSWRGAEVENILRFEKDFPGARIVRLESNYRSTR
PILAAAAGLIAKNEGRLGKTLRPGRNDAEGEKVRIVSLWDSEEEARMVGERIEQAQRDGI
SAGEMAILVRAGFQTRAFEERLIVLGVPYRVVGGLKFYERAEVRDAMAYMRILHQPSDDL
AFERIVNTPRRGVGDSGLQHMHVAAREQGIPLAVAAEQLARTDAFRPKPRAALRELFDGF
ARWREMLAREGHVVTVATMLDESGYTEMWKQDKSAEAPGRLENLKELLRAIGEFESLAGF
LDHVALVTENDENASEAKVSLMTLHAAKGLEFDLVFLPGWEEGLFPHQRALDEGGTKGLE
EERRLAYVGITRARKLAVISHAANRRIYANWSAAIPSRFLDELPREAVEVEGSSAMQRQR
MATAPSVFAHGPISAGRPRIMETKLSEKGAWEVQARPARKDAMTVGTRVFHQKFGYGRVT
RVEDDRLDVDFEKTGSKRVLDRFVERA
NT seq 2244 nt   +upstreamnt  +downstreamnt
atgccggccacggggggcgggctgcggaacctgccggaacccgactacctcggcaagctg
aacccggagcagcgggcggcggtggagacggtggacgggccgctgctggtgctggccggg
gcggggacgggcaagacgcgggtgctgaccacgcgcttcgcccatatcctgatgacgcgg
aaggccttccccaaccaagtcctggcggtgaccttcaccaacaaggcggcgcgggagatg
cgggagcgtgtctcccatatcctgggccgcccggcggaggggctctggcttggcaccttc
cacgcgctctgcgcccggatgctgcggcggcacgcggaatatgtccggctgacctcctcc
ttcaccatcctggacacggacgaccagctccgcttgctgaagcaggtgatggaggcggcg
ggcggcatcgaccagaagcgctggccggcccaggggctgatggcggtgatccagcgctgg
aaggaccgcggcctgacgccggagcgggtgacgccggcggaggacagcgacttcgccaat
ggccgcgcgcggcagctctacgaggcctaccagtcccggctgcgggacctgaacacggtc
gatttcggcgacctgctgctgcacatgacggagatcctgcgaacccagcccgacgtgctg
gcgcagtaccaccgcagcttccgctacatcctggtggacgagtaccaggacaccaacacg
gtgcagtacctctggctgcggctgctggcgcaggggcaccggaacatctgctgcgtgggc
gacgacgaccagtcgatctactcgtggagaggcgcggaggtggagaacatcctgcgcttc
gagaaggacttccccggtgcgaggatcgtgcggctggagagcaactaccgctccacgcgg
ccgatcctggccgccgccgccgggctgatcgcgaagaacgagggacggctgggcaagacg
ctgcggccggggcgcaatgatgcggagggcgagaaggtccgcatcgtctcgctctgggac
tccgaggaggaggcccgcatggtcggcgagcgcatcgagcaggcacagcgcgacgggatc
agcgcgggcgagatggcgatcctcgtgcgcgccggcttccagacgcgggccttcgaggag
cggctgatcgtgctcggcgtgccctatcgcgtcgtgggcgggctgaagttctacgagcgg
gccgaggtgcgcgacgccatggcctatatgcgcatcctgcaccagccgagcgacgacctg
gccttcgagcgcatcgtcaacacgccgcgccggggcgtgggcgacagcgggctgcagcac
atgcatgtggcggcgcgcgagcagggcatcccgctcgccgtggcggcggagcagctggcg
cgcaccgatgccttccgccccaagccgcgcgcggcgctgcgcgagctgttcgacggcttc
gcgcgatggcgcgaaatgctggcgcgcgaggggcatgtggtgacggtggccaccatgctc
gacgagagcggctatacggagatgtggaagcaggacaagtcggccgaggcgccgggccgg
ctggagaacctgaaggagctgctgcgcgcgatcggcgagttcgagagcctcgcgggcttt
ctcgaccatgtggcgctggtgaccgagaacgacgagaacgcctcggaggccaaggtctcg
ctgatgacgctgcacgcggccaaggggctggagttcgacctcgtcttcctgccgggctgg
gaggaggggctcttcccgcaccagcgcgcgctggacgagggcggcaccaagggtctggag
gaggagcggcgcctcgcctatgtcggcatcacccgggcgcggaagctcgcggtgatcagc
cacgcggcgaaccggcggatctatgccaactggtcggccgccatcccgtcgcgcttcctg
gacgagctgccgcgcgaggcggtggaggtcgagggctcctcggccatgcagcggcagcgc
atggcgacggcgccgagcgtcttcgcgcacggcccgatcagcgccgggcggccgcggatc
atggagaccaaactctccgagaagggggcctgggaggtgcaggcgcgcccggcgcgcaag
gatgccatgaccgtcggaacccgcgtcttccaccagaaattcggctacggacgcgtgacc
cgggtggaggatgaccgcctggacgtggatttcgagaagaccggcagcaagcgtgtgctg
gaccgtttcgtggagcgcgcctga

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