Rossellomorea sp. y25: V2W31_01375
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Entry
V2W31_01375 CDS
T10157
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
ross Rossellomorea sp. y25
Brite
KEGG Orthology (KO) [BR:
ross00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ross03021
]
V2W31_01375 (sigB)
Transcription machinery [BR:
ross03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V2W31_01375 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HNF-1_N
HTH_3
GerE
DUF134
HTH_37
Sigma70_ECF
DUF1492
DUF6761
TetR_C_36
PhyR_sigma-like
HTH_28
HTH_50
IF2_N
HTH_1
KORA
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
WWO81990
LinkDB
All DBs
Position
250870..251667
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AA seq
265 aa
AA seq
DB search
MKKLSQPNQQAQKEKVLQWIKDYQDRQDDDAQSQLILHYQNLVESIARKYSKGRSFHEDI
IQVGMIGLLGAIRRYDESFGRSFEAFAIPTIIGEIKRFLRDKTWSVHVPRRIKELGPKIK
STVEELTNKLERSPQVHEIAEYLEVSEEEVLEAMEMGRSYQALSVDHSIEADSEGSTVTI
LDIVGDQDEGYEKVNQRLVLEKVLHVLSDREKAIIQHTYLENLSQKEAGEKLGISQMHVS
RLQRRAIKKLREAIQEEMSDSESHY
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactatctcaacctaaccagcaggcccaaaaagaaaaagtacttcaatggatt
aaagactatcaggatagacaagatgatgatgcgcaaagtcaactgatcttacactaccaa
aatcttgtagagtccattgcgaggaaatattcaaagggaagatctttccacgaggacatt
atccaagtggggatgattggattgcttggtgcaatcagaaggtacgatgaatctttcggt
agatcattcgaggcttttgcgattccgactatcattggagaaatcaaaaggtttctaaga
gataaaacgtggagcgtacatgttccacgaagaataaaagagctgggaccaaaaatcaaa
tctaccgttgaagaattaacgaataaattggaacgttctccacaagtccatgaaattgct
gaatatctggaagttagtgaagaagaagttctggaagcgatggaaatgggtaggagttat
caagcattatctgtggatcactcgattgaagcggattcagaggggagtacagtaacgata
ctggatattgtgggagatcaggatgagggctacgagaaagttaatcagcgactggtcctt
gagaaagtgcttcatgtgctttccgatagggaaaaggctataatacaacacacttattta
gaaaatctaagccaaaaagaagctggcgagaagctcggtatttcccaaatgcatgtttcc
cgtttacaaagaagagccattaaaaagcttagggaagccattcaggaagagatgagcgat
tcggagagtcattattaa
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