Rossellomorea sp. y25: V2W31_01810
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Entry
V2W31_01810 CDS
T10157
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ross Rossellomorea sp. y25
Pathway
ross03420
Nucleotide excision repair
ross03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ross00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V2W31_01810 (pcrA)
03430 Mismatch repair
V2W31_01810 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ross03400
]
V2W31_01810 (pcrA)
Enzymes [BR:
ross01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V2W31_01810 (pcrA)
DNA repair and recombination proteins [BR:
ross03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V2W31_01810 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
V2W31_01810 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Pro_dh
DEAD
Motif
Other DBs
NCBI-ProteinID:
WWO82055
LinkDB
All DBs
Position
332695..334920
Genome browser
AA seq
741 aa
AA seq
DB search
MQFLTDRLLNGMNPEQAEAVKATEGPLLIMAGAGSGKTRVLTHRIAYLMVEKGVNPYNIL
AITFTNKAAREMKDRIHNILGGASENIWISTFHSMCVRILRRDIDRIGMNRNFTILDSTD
QQSVIKAILKEKNIDPKKFDPRSLLGSISSAKNELTTPEELSKQVGGYYDQVVSDVYTEY
QKRLRKNQALDFDDLIMTTIQLFQRVPEVLEFYQRKFQYIHVDEYQDTNRAQYMLVKLLA
SRFQNLCVVGDSDQSIYRWRGADIANILSFEKDYPRATVIFLEQNYRSTKRILQAANEVI
QKNSNRKPKNLWTENHDGEKISYFRADTEQTEAQFVTGKIKEMMESGKRKYSDFAILYRT
NAQSRVMEEVLLKSNIEYSIVGGIKFYDRKEIKDILAYLRLISNPDDDISLIRVINVPKR
GVGATSVDKIARYAQDHDISMFRALEEADFIGLSPKITKAVIEFKEMVKGYTAMQEYLSV
TELVEEILEKSGYIEMLKAEKSIESQSRLENLDEFLSVTKSFEQSNDDKSLVAFLTDLAL
VADIDKLDEDDQPKDSVILMTLHAAKGLEFPVVFLMGMEEGVFPHSRSLMEEDEMEEERR
LAYVGITRAEEQLYLTNAQMRTLFGQTKMNPVSRFIQEIPAELLDDVMAEKKSAFTPFGK
SAAKAPARPAPRKPVSRPVQTTTGGESVAWQVGDKAQHKKWGTGTVVSVKGSGDSVELDI
AFPSPMGIKRLLAKFAPIEKA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttttgactgatcgattgttgaatggaatgaatcccgagcaggcggaagctgtg
aaggcgacagaagggccgttactgatcatggcaggggcaggctccgggaagacgagagta
ttgacgcatcgaattgcgtatttaatggtggaaaaaggggtcaatccttataatatttta
gcgattacctttacaaataaagcagcgagagaaatgaaggatcgtattcataacatactg
ggcggggcttctgagaacatttggatctcaaccttccacagcatgtgtgtgcgaatcctg
cgacgggatattgatcgcatcgggatgaaccgtaattttacgatccttgattctaccgat
cagcagtcggttatcaaagcgattttaaaagaaaaaaatatagacccgaaaaaatttgat
ccccgttcgcttttgggatccatcagctctgcaaaaaatgagctgacgactcctgaagaa
ttgtccaagcaagtagggggttattacgatcaagtggtatctgatgtgtatacagaatat
cagaagcgtttacggaagaatcaggccctcgattttgatgatttgatcatgacgacgatc
cagttgtttcagcgtgtaccggaagtattggaattctatcaaagaaagttccaatacatc
catgtcgatgagtatcaagatacgaacagggctcaatatatgctcgttaaactgctggct
tcccgttttcagaacttgtgtgtcgtcggggattccgatcaatcgatatatcgctggcga
ggtgcggacattgccaatatcctttcctttgaaaaggattatccaagagcaaccgttatt
ttccttgaacaaaattatcgttcaacgaagaggatcctgcaggcagcaaacgaagtgatc
cagaagaactcgaatcgtaaaccgaagaatctatggacggaaaatcatgacggtgaaaag
atctcgtatttcagagcggataccgagcagaccgaggctcaatttgttaccggtaaaatc
aaagagatgatggaaagcggtaagaggaagtactctgatttcgccatcctttatcgtaca
aacgctcagtcccgtgtgatggaggaagttttactcaaatcgaatatcgagtactccatc
gtcggcggcatcaagttctatgaccgcaaagagatcaaggacatattggcttacctgaga
ctcatctcgaatccggatgatgacatcagcctaatacgtgtcattaatgttccgaagcgg
ggcgtaggggcaacctctgtggataaaattgcccgttatgcacaggatcatgatatttcc
atgttcagagcgttggaagaagcggactttatcgggctcagtccgaaaataacgaaagct
gtcattgaattcaaggaaatggtgaaaggctatacggccatgcaggaatatctgtccgta
accgagcttgtagaagaaatactggagaaatccggctacatcgagatgttaaaagcagaa
aagtcgatcgagtctcaaagtcgcttggagaacttggacgagttcctgtctgtgacgaaa
agctttgagcaatccaacgatgacaagagtctggttgcatttttaacggacctggcatta
gtggcggatatcgataagcttgatgaagacgatcagccaaaagactcggttattttgatg
acccttcatgctgcaaaaggtcttgagttccctgtcgtattcttaatggggatggaggaa
ggggttttccctcacagccgttccctgatggaagaagatgagatggaagaagagcgcaga
ctggcttatgtaggaattacccgtgctgaggaacagctctatttaacaaatgcacaaatg
agaactctcttcgggcaaacgaagatgaaccctgtgtcccggttcattcaggagatccca
gctgaactgttggatgatgtgatggcagaaaagaagagtgccttcacacctttcgggaaa
tcagcagcgaaagcaccagcgcgtcctgccccgcgtaagcccgtttcacgaccggttcaa
acgacaaccggtggagaatctgttgcatggcaagtaggggacaaagcacagcataagaaa
tgggggacagggacggtcgtcagtgtgaaaggctctggagacagtgtagagcttgacatt
gcgttcccgagcccaatgggaatcaagcgtcttcttgccaaatttgctcctattgaaaaa
gcgtag
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integrated database retrieval system
