Rossellomorea sp. y25: V2W31_01985
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Entry
V2W31_01985 CDS
T10157
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ross Rossellomorea sp. y25
Brite
KEGG Orthology (KO) [BR:
ross00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ross03009
]
V2W31_01985 (rlmD)
Enzymes [BR:
ross01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
V2W31_01985 (rlmD)
Ribosome biogenesis [BR:
ross03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
V2W31_01985 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
TRM5-TYW2_MTfase
PrmA
Methyltransf_25
MTS
Methyltransf_15
Methyltransf_11
RrnaAD
Methyltransf_32
N6_N4_Mtase
TPMT
Methyltransf_12
PCMT
Methyltransf_23
TRM
Methyltransf_2
DOT1
CooC_C
Motif
Other DBs
NCBI-ProteinID:
WWO82090
LinkDB
All DBs
Position
370630..372006
Genome browser
AA seq
458 aa
AA seq
DB search
MSKKAPVQKNDYIDEAVFEDLTHDGNGVTKVDGYPLFVPNALPGEEGKVKVVKTSKGYGF
GRLTERTKESPFRQEPPCPIYKECGGCQIQHMTYEGQLQAKEKNVRDVMQRIGKLGDIHV
HPVMGMEEPWRYRNKAQVPVGEKEGRFVAGFYQKRSHEIIDMDKCIIQYEKNDEVIQHVK
NICEKLEVRPYDEKNHKGILRHIMTRTAYTTGEVMVVLVTRTPELPHKNRIVEELVENIE
GLKSVVHNVNPKKTNVIMGDTTRVLWGEEVIYDYIGDVKFAISARSFYQVNPEQTKVLYD
KALEYADLQGEETVIDAYCGIGTISLFLAQKAKKVYGVEIVPQAIEDAKQNAELNEMTNV
EFKAGPAEVVIPDWYKEGIRADVLVVDPPRKGCDEALLNTILAMKPKKVVYVSCNPGTLA
RDLRILEDGGYKTKEVQPVDMFPQTMHCEAVAKIELVE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaaaagcgccagttcaaaaaaatgattatatagatgaagcagtatttgaagat
ctgacccatgacgggaatggggtgacgaaggtggacggatacccattattcgttcccaat
gcactaccaggtgaggaaggcaaggttaaagtggtgaaaacgagtaaaggctatggattt
gggcggctgacagagcgcaccaaggaaagtccgtttcgccaggagcctccatgtccgatc
tacaaagaatgcggcggctgccagattcagcacatgacctatgaaggacagctgcaagca
aaagaaaaaaatgttcgtgatgtcatgcagcgtatcggaaagcttggagacattcatgtc
catccggtaatggggatggaagaaccgtggcgttatcgtaacaaagcccaagtgcctgta
ggggaaaaggaagggcgctttgtagcgggcttctatcaaaaacgaagccatgaaatcatc
gatatggacaaatgtatcatccagtatgaaaaaaatgatgaagtgattcagcatgtgaag
aatatatgcgagaaactggaggtccgtccctatgatgagaagaatcataaggggatattg
cgtcacattatgacccggacggcgtatacgactggagaggtgatggtcgtattggtaaca
aggacgcctgagctccctcataagaatcggattgtagaggagcttgttgagaatattgaa
ggattgaaatcggttgttcataatgtgaatcctaagaaaacgaacgtgattatgggggat
accactcgggttctatggggggaagaagtgatctatgattacatcggagacgtgaaattt
gcgatttccgccagatccttctatcaggtgaaccctgagcaaacgaaggttctctatgat
aaagcattggaatacgctgatttacaaggagaagaaaccgtcatcgatgcgtattgcgga
attggaacgatctctctattccttgcccaaaaagcgaagaaagtgtacggggttgaaatt
gtcccgcaggcgatagaagatgcgaagcaaaatgccgagttaaatgaaatgaccaatgta
gagtttaaagcaggacctgccgaggtggtcattcctgattggtataaagaagggatcaga
gctgacgtccttgtcgtggaccctccacgtaaggggtgtgatgaagcacttctaaatacg
atcctggccatgaagccgaagaaggtcgtctatgtatcctgtaaccccggtacacttgca
cgagaccttagaatattagaagatggcgggtataaaacaaaagaggtccagcctgttgat
atgtttccgcaaacgatgcactgtgaagccgttgcgaagattgagttagtagaataa
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