Rossellomorea sp. y25: V2W31_05430
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Entry
V2W31_05430 CDS
T10157
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ross Rossellomorea sp. y25
Pathway
ross03420
Nucleotide excision repair
ross03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ross00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V2W31_05430 (helD)
03430 Mismatch repair
V2W31_05430 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ross03400
]
V2W31_05430 (helD)
Enzymes [BR:
ross01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V2W31_05430 (helD)
DNA repair and recombination proteins [BR:
ross03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V2W31_05430 (helD)
MMR (mismatch excision repair)
Other MMR factors
V2W31_05430 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
SLFN-g3_helicase
PhoH
DEAD
AAA_30
NACHT
AAA_16
DUF7809
Motif
Other DBs
NCBI-ProteinID:
WWO82734
LinkDB
All DBs
Position
1084852..1087179
Genome browser
AA seq
775 aa
AA seq
DB search
MNLEIRQEQERVDRVIETIVEQIGRLEDETGRRQEEVVEIRKHFWDEVKVNTDTFDDFLE
TVLSLRQQAQVLTVSQSTHRQAVKKLSALQRMKGKPYFGRIDFTEEGESESEKVYIGIAT
LTDQSGEDFLVYDWRAPISSVYYDYPPGPAEYITPGGIIEGTLEKKWQYLIRDGVIESMF
DTSLTIGDEILQEVLGKRTDTHMNSIVATIQKKQNQIIRHDYGRLLIVQGAAGSGKTSAA
LQRIAYLLYKYRGSLKADQIILFSPNAMFNSYVSNVLPELGEENMEQVTFQEYLDHRLSA
EFELEGPYSQLEYVLTETGAPSYRTRTASISFKASTDFFDVIKLYRTSLEESGMRFKGIK
FRGQPIVTANQIKERFYTSDTSLRFHNRLEKLTEWINQQIDEAEKLERSKPWVEEEIELM
SNEDYHKAHQHLQKKNPSNDYEIEYDALARLTVRRRFKGLRKRINRFQYVDVRGMYLQLF
ADPTNISTLWKGEIPEEWEDICRSTVNMLEEGELSYEDATPFLLLKELILGFQTNTSIKH
VLIDEAQDYSPFQFEFIKRLFPSAKMTVLGDFNQAIFAHAREHVDFSTLTGLYGQGETTM
INLTQSYRSTKPIIEFTRRLVPGGDQISPFDREGDKPVLTRVTDHDELHSRIAAKIEEWK
DRDYHSIAVICKSARESEAAYASLRGVEGIKLMKSASLEYEQGVIVIPAYLAKGIEFDAV
ILYDASASSYGDDSLSRLFYTACTRAMHELQLFSVGEPSPFFEHIKADLYSSESF
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgaaattcggcaggagcaggaacgtgtggaccgtgtcattgagacaattgtg
gagcaaatcggtcgtctggaggatgaaaccggacgacgacaagaggaagtggtggagatc
cgtaaacacttctgggatgaggtcaaggtgaatacggatacgttcgatgattttctggaa
accgtcctcagtttgaggcagcaggcacaagtgttgaccgtcagtcaaagcactcacagg
caggcagtaaaaaaattatccgctctacaacgcatgaagggtaagccttatttcggacgg
attgattttaccgaagaaggagaatcggagtcggaaaaggtctatatcggcattgccact
ctcacagatcaaagtggcgaggacttcctggtctatgattggcgcgctccgatctcgagc
gtttactatgattatccgccaggtcccgctgaatacatcacacccggtgggataatcgaa
gggacactggagaaaaaatggcagtatctcatccgggatggcgtcatcgaatccatgttt
gataccagcctgacgattggggatgaaattttgcaggaggtattggggaagcggaccgat
acccatatgaacagcatcgtggcgaccatccagaagaagcagaatcaaatcatcaggcac
gattacggccggctgctcattgttcaaggtgcagcgggcagcgggaaaacatcggccgcc
cttcagcggattgcttatttactttataagtatcggggcagtctcaaggctgatcaaatc
attctgttctccccgaacgccatgttcaacagctacgtatcgaacgtactgccagagctt
ggtgaagagaatatggagcaggtgacctttcaggaatatctggaccatcggttgagtgcg
gagttcgaattggagggaccatacagtcaattggaatacgtcctgactgaaacgggtgcc
ccctcgtaccggaccaggacggcgagtatttccttcaaggcatcgacggatttctttgat
gtcattaaattatacagaacgtcactggaggaatccgggatgcgattcaaaggaatcaag
ttccggggacagccgatcgtcacagcaaatcaaatcaaggaacgattttataccagtgat
acgtcattgcgtttccataacaggctggagaaattgaccgagtggatcaatcaacagatc
gatgaagcagagaagcttgaacggagcaagccttgggtcgaagaagaaatcgagctgatg
agcaatgaggactatcacaaagcgcatcagcacctgcagaagaaaaatccgtctaatgat
tatgagatcgagtatgatgcgctggccagattgaccgttcgcaggagattcaagggactg
cgcaagcgaatcaataggtttcaatatgtggacgtgagaggaatgtatcttcagcttttt
gctgatcctacgaacatctccaccttatggaagggtgagatcccggaagagtgggaggat
atttgccgttcgacagtgaacatgctcgaggaaggggaactgtcctacgaggatgcgact
ccttttttactgttgaaagagctgattcttggctttcagaccaatacgtcgattaagcat
gtgctcatcgacgaagctcaggactactcaccttttcaattcgaattcatcaagcgtctg
tttccttcagccaagatgaccgtgcttggcgactttaatcaggccatctttgcccatgca
cgtgagcacgtggatttcagcacattgaccggactctatggacagggtgagaccacaatg
attaacctgactcaaagctacaggtccaccaagccgatcatcgagttcacacgccggctt
gtgcctggcggcgaccaaatctccccatttgaccgggaaggggataaaccggtgctcacc
cgggtcactgatcacgatgaacttcacagccgaattgcagcgaaaatagaagaatggaag
gaccgggactatcactccattgccgtcatatgtaaatctgcgagagaaagtgaagccgca
tacgcctccttaaggggtgtggaaggcatcaagctcatgaaaagcgcttctcttgaatac
gaacagggcgtgatcgtcatcccggcatacctagcaaaaggaatcgaatttgacgccgtc
atcctttatgacgcatctgccagctcgtatggtgacgatagcctcagccgcttattctac
acggcctgcacaagagccatgcacgagctgcagctattcagcgtaggtgaaccgagtcca
ttctttgagcatataaaagcggacctttatagtagcgaatcgttttaa
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