Rossellomorea sp. y25: V2W31_05765
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Entry
V2W31_05765 CDS
T10157
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ross Rossellomorea sp. y25
Pathway
ross03018
RNA degradation
Brite
Enzymes [BR:
ross01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
V2W31_05765
Messenger RNA biogenesis [BR:
ross03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
V2W31_05765
Ribosome biogenesis [BR:
ross03009
]
Prokaryotic type
rRNA helicases
V2W31_05765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
WWO82797
LinkDB
All DBs
Position
1161264..1162709
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AA seq
481 aa
AA seq
DB search
MSIKQFTDYKLSNEIVRALSGLGYQAPTEVQSKVLPLALEKKDLVVRSQTGSGKTASFGI
PICEMVQWEENKPQALVLTPTRELAVQVKEDITNIGRYKRIKAAAVYGKSPFQRQKLELK
QKNHVVVGTPGRVLDHIEKGTFPLDKLSYLVIDEADEMLNMGFIEQVEAIIQELPTERVT
LTFSATLPEDVETLCHKYMKKPVHIEIKATGITTDKIDHSLIEVREENKLTLLKNVTTVE
NPDSCIIFCRTKENVDTLCDELDRSGYPVDKIHGGMIQEARFEVMDDFKRGEFRYLVATD
VAARGIDIENITHVINYDIPMEKESYVHRTGRTGRAGSEGKAITFCTPYEDKFLAEIEDY
IGFTIPKLQSPSEEAVSKAKADFDRKLDTEPDFKSDKSEQLNRGIMKLYFNGGKKKKIRA
VDFVGTIAKLDGVTADDIGIITIQENLSYVEILNGKGPLVLQAMKKTTVKGKMLKVHEAR
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtataaaacaatttacggattataagcttagtaatgaaattgtaagggctctatcc
ggtttagggtatcaagctccaaccgaggttcaatccaaggtgcttccattggctctggag
aagaaggatcttgttgtgcgttcccaaacaggaagcggtaagacagcctctttcgggatt
ccgatttgcgagatggtacagtgggaagagaataagcctcaagcccttgtgctgacgcca
acacgtgaactcgcggttcaagtaaaagaagacatcacaaacatcggtagatataagcgt
atcaaagcggctgccgtgtacgggaaatctccttttcaacgacaaaaacttgagcttaag
cagaaaaatcatgtcgtagtaggcactcccggtcgtgttctcgatcatattgaaaaagga
acattcccactggataagctttcgtaccttgtaatcgacgaagccgatgagatgcttaac
atggggtttatcgaacaggtggaagcgattattcaggagctgccgactgagcgggtaacg
ctgacattctcagctacattaccagaggatgtggaaacactttgccataaatatatgaag
aaaccagttcacattgaaatcaaagcaacgggtattacgacagataaaatcgatcactct
ttgatcgaagtgagagaggagaataagctgactctgctgaaaaacgtcacaactgttgaa
aatcccgatagctgcatcatcttttgccgaacaaaagaaaatgttgatacattatgtgat
gagttggatcgatcagggtatcccgttgataaaattcatggcggtatgattcaggaagcg
cgctttgaagtgatggacgattttaaaagaggggaattccggtacctggtggcaacggat
gtggcagcccgtggaatcgatattgaaaacattacacatgtcatcaattatgatatcccc
atggaaaaagaaagttatgttcaccgcacgggaagaacgggccgcgcaggttctgaaggg
aaggcgatcaccttctgcacaccgtatgaagataaattccttgccgagattgaagactat
atcggatttacgattccaaagctgcagtcgccgtcggaagaagcagtgtcaaaagccaaa
gcggattttgatcggaaattagacacggaacctgattttaaatcagacaagagtgagcaa
ttgaacagaggtatcatgaagctctacttcaatggtgggaagaaaaagaaaatcagggca
gtcgatttcgtcggaacaattgcgaaacttgatggcgtgactgctgacgacatcgggatc
atcacgatccaggaaaacctttcgtatgtggagatattgaatggcaaagggccgttggtc
ttacaagcgatgaagaaaaccacagtcaagggtaagatgctgaaggttcatgaagcgagg
aaataa
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