Rossellomorea sp. y25: V2W31_12610
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Entry
V2W31_12610 CDS
T10157
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
ross Rossellomorea sp. y25
Pathway
ross02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ross00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V2W31_12610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ross03000
]
V2W31_12610
Transcription factors [BR:
ross03000
]
Prokaryotic type
Helix-turn-helix
Other families
V2W31_12610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
HTH_3
HTH_19
TPR_8
HTH_31
TPR_1
Motif
Other DBs
NCBI-ProteinID:
WWO79858
LinkDB
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Position
2520244..2521500
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AA seq
418 aa
AA seq
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MTIGSKIRFHRLKRNLTQEDLSKGIISVSYLSKLENNQVSPSNDIINLLCERLGVNNLLD
NPNHLNKLLENWNHALLWNKTEEAESINKVIKKELEQSDDLTPHLFHKILCFRVHLIKGS
LQKAFEHMIQIQANYKELSDTLKFYYHKYKGNYYYLIEEYDKAQGELKEAETYYVLGNVI
NEEERADLYYLFSLVLTRLGTYRLAIFYGEKALSIFQGVYYQKRCAEVHLILGICYRRIR
YSEEAMKHYEWANFISHSINYTSLNSKVEQNLGYLKSFMNKSEEAIQHYLRSIELKDSDE
EGKLYSILSLVKEYYKKNQFSEVRFWLPKGLHLCSKQKYPDKFYQLSYYQFALNDFPQGF
ETFMKEYTLPFFKKSGSHLLYAEYSKFLGQYYQGIRKYKHAAFHLNEANVIYEEMLTL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcggttctaaaatccgctttcacagacttaaacggaatttaacacaagaagat
ttatcaaaagggattatttccgtatcatatctttccaaactggaaaacaatcaagtttct
ccgtcaaatgacataattaatctgctctgtgagcgattaggtgtaaataatctgcttgat
aacccaaaccatttgaacaagcttctagaaaactggaaccatgcattgctgtggaataaa
acagaggaagctgagtccatcaataaggtcattaagaaggaacttgaacaatcggatgac
ctcactcctcatttattccataagatcctttgcttccgtgtccatttaattaaagggagc
cttcagaaagcttttgagcatatgatacagatccaagccaattataaagaactctcagat
acgcttaaattctattatcacaaatacaaagggaattactattatttgattgaagagtac
gataaagcccaaggagaactgaaagaagctgaaacctactatgtacttggtaatgtgatt
aatgaagaggaacgggcagatttatattatttattcagcttagtcttgacccgcttaggc
acgtaccgtttagcaatcttttatggagagaaggcactttccattttccagggcgtctac
taccagaaaagatgcgctgaggtacatttgattttagggatttgctatcggcgtatacgt
tatagtgaagaagcaatgaagcattatgagtgggccaatttcatttcacattccataaac
tatacgtcattaaattccaaggtggagcagaacctagggtatttgaaatcatttatgaat
aagagtgaagaagccattcagcattatttgcgaagcattgaattgaaagattcagacgaa
gaaggaaagttatactccattctctctctggtcaaagaatattataaaaaaaaccaattt
tcagaggtgcgtttctggttacctaaaggattacatctttgctctaaacaaaagtacccg
gataaattctatcaattatcttattatcagtttgctttaaatgatttcccacaaggtttt
gaaacgtttatgaaggagtatacactgcccttttttaaaaagagcggctcccatctatta
tatgctgagtattctaaattccttggtcagtattaccaggggattagaaaatataaacat
gcagcatttcatctaaatgaagcgaatgtcatttatgaagaaatgttaactttatag
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