Rossellomorea sp. y25: V2W31_15845
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Entry
V2W31_15845 CDS
T10157
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ross Rossellomorea sp. y25
Pathway
ross03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ross00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V2W31_15845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ross03400
]
V2W31_15845
Enzymes [BR:
ross01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
V2W31_15845
DNA repair and recombination proteins [BR:
ross03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V2W31_15845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
UvrD-helicase
AAA_22
AAA_12
AAA_16
DEAD
AAA_5
NTPase_1
nSTAND3
MCM4_WHD
UvrD_C
T2SSE
AAA_18
AAA
AAA_29
AAA_28
NPHP3_N
Mg_chelatase
HHH
DUF4926
TsaE
DUF4037
AAA_17
Motif
Other DBs
NCBI-ProteinID:
WWO80464
LinkDB
All DBs
Position
complement(3122398..3124788)
Genome browser
AA seq
796 aa
AA seq
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MSQQDSLKLFGEEEIYIKGRHLVTIFHNEENLYTVVRIRVDETNDTYEDKEAVVTGNFPK
IHEDETYVFYGRFQDHPKFGMQFHAKHFKKEIPQTTQGVVHYLSSDLFKGIGKKTAEKIV
EHIGENAITKILENPSLLDEIPKLPKEKAKSIYDTLSEHQGLERVMIMLNDLGFGPQISM
KVYQAYKEQALDIIQNNPYKLVEDIEGIGFTRADEIGSKIGLTGSHPDRIKAGCLYTLEQ
TCVKQGHVYLEAEELIVTVKELLEKSQPEKVDYTEISSQLVSLEEEGKVIGEGTKVYVPS
LYFSEKGIVTNIEKILSQTQYKDQFPQSEFLLSLGALEDRLGVQYAPSQKEAIETALMSP
MLLLTGGPGTGKTTVIQGIVELFADLHGCSLDPKDYKDEPFPVLLTAPTGRAAKRMTEST
GLPAMTIHRLLGWNGQEGFKSDEERAIEGKLLIVDEVSMVDTWLAHQLLKALPEDIQVIL
VGDEDQLPSVGPGQVLKDLLKSEVVPTVRLTDIYRQEEGSSIIELAHYMKRGQVPQDLTK
QQKDRSFFPCRTNQISEVVQKVVENAKKKGYSPKDIQVLAPMYRGPAGIDRLNELLQEIF
NSNDGTRKEIAFGDVKYRIGDKVLQLVNQPENNVFNGDIGEIVSIFYAKENTEKQDMIIV
SYEGNEVTYTRQDLMQITHAYCCSIHKSQGSEFPIVILPVVKSYYRMLRRNLLYTAITRS
KQFLILCGELDAFTLGVEREDDFLRKTTLSEKLNGLTAAENTAVSPEEGLPIEEILLNED
PMIGMEGISPYDFMKA
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
ttgagccagcaagattctttaaagctgtttggtgaggaagaaatctatataaaaggaagg
catcttgtcacgatttttcataatgaggaaaatctctataccgtcgtccggatccgggtg
gacgaaacgaatgatacttatgaagacaaagaagcggtcgtaaccgggaattttcctaag
attcatgaagatgagacctacgtgttttatgggaggtttcaagatcacccaaagtttggc
atgcagtttcatgcaaagcatttcaagaaagaaatcccacaaaccacacaaggtgtcgtc
cattatttatcaagtgatttatttaaaggaatcgggaagaaaacagctgagaagatagtg
gagcatatcggggaaaacgccataaccaaaatactcgaaaatccgagcctgctggatgaa
attccaaagcttccaaaggaaaaggcgaaaagtatttatgatacgctttccgagcatcaa
ggcttggagcgggtcatgatcatgctgaatgacctgggatttggcccccaaatttccatg
aaggtctatcaagcctataaagagcaggcacttgatatcattcaaaataatccttataag
cttgtggaagatattgaaggaatcggctttacccgggccgatgagattggttctaagatc
gggttgacaggcagtcatcccgaccggatcaaagcaggctgtttatacacccttgagcaa
acatgtgtgaagcagggccatgtgtatctcgaagcagaagaactcattgttacggtgaag
gagctgcttgagaaaagtcagcccgaaaaggtcgattacactgaaatatccagtcaactg
gtttccttggaggaagagggtaaagtcattggagaaggcacaaaggtatatgttccttct
ctttacttctcggaaaaaggaatcgtgacaaacattgaaaagattttgtctcaaacccaa
tataaagatcaatttcctcaatccgaatttcttctatcacttggagcactggaggaccga
ctgggagttcaatacgcaccttcacaaaaagaagccatcgaaacagcgttgatgtccccc
atgcttctgttaaccggaggacccggaaccggtaagacgaccgtcattcaggggattgtg
gagctgtttgcggatctccatggctgctccttggatcccaaggattacaaggatgaaccc
tttcctgtcttactgacagccccgactggtcgagcggcaaagcgcatgacagaatccacg
ggcctccctgccatgacgattcaccgacttttaggctggaacggtcaagaaggatttaag
agtgatgaagaacgggcgattgaaggaaagttgttaattgtggatgaagtgtccatggtc
gacacgtggcttgcccatcaattattgaaggccctgcctgaggatattcaagtgatactt
gtcggggatgaggatcaattaccgtctgtcggtcctggccaggtactaaaggacctattg
aaatcggaagtggtgccaacagtcaggttaacggatatttatagacaggaagagggctcc
tccattattgaacttgctcattatatgaaaaggggacaggtacctcaagacctgaccaaa
cagcaaaaggatcgatccttcttcccatgcagaaccaatcaaatatccgaagtcgttcaa
aaagtcgttgagaacgcgaagaaaaaagggtactccccaaaggatatacaggtcctagct
cctatgtatcgaggccctgcaggtatcgaccgattgaatgagcttcttcaggaaattttc
aatagcaatgacggtacccggaaagagatcgcctttggagatgtgaaatatcgtattggg
gataaggttcttcaacttgtcaatcaacctgaaaacaatgttttcaacggggatatcggt
gaaatcgtctcgatcttttatgcgaaggaaaacaccgagaagcaagatatgatcattgtt
tcatatgagggaaatgaggtcacctatacgaggcaagatctcatgcaaattacccatgcg
tattgctgctcgatccataagtcacaaggaagtgagtttcccattgtgatcttacctgtc
gtgaaaagctattatcggatgctgagaagaaatcttctttacactgccattaccaggagc
aagcaattcctcattctttgtggggagcttgatgcttttacccttggagtagagagggaa
gatgattttctccgcaaaacgaccctaagcgagaaactgaacggtttaaccgctgcagaa
aacacggcagtttctcctgaagaaggtttacccattgaagaaatcttgctgaatgaggat
ccaatgattggaatggaaggcatcagtccctatgatttcatgaaagcataa
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