Rossellomorea sp. y25: V2W31_15955
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Entry
V2W31_15955 CDS
T10157
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ross Rossellomorea sp. y25
Pathway
ross03410
Base excision repair
ross03430
Mismatch repair
ross03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ross00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V2W31_15955 (recJ)
03430 Mismatch repair
V2W31_15955 (recJ)
03440 Homologous recombination
V2W31_15955 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ross03400
]
V2W31_15955 (recJ)
DNA repair and recombination proteins [BR:
ross03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
V2W31_15955 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
V2W31_15955 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
V2W31_15955 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WWO80483
LinkDB
All DBs
Position
complement(3145425..3147788)
Genome browser
AA seq
787 aa
AA seq
DB search
MLNSKTRWMMTESDQHKISELANELKVPSLVAKLLINRDLDDVEEARNFLFDTGDSFHDP
FLFEDMKKATERIHKAIENGERILVYGDYDADGVSSTSVLMTVLRDIGADVEFYIPNRFS
EGYGPNEGAFRWAKDEEFTLIITVDTGISAVNEAKLAKELEIDLIITDHHEPGPELPPAF
ALIHPKVEGTTYPFGELAGVGVAFKLAHALYGELPTHLLDLAAIGTIADLVPLRGENRLL
AKRGISQLRVSNRLGIKALCRIANAQQQEITEESIGFMIAPRINAVGRLGDADPAVDLML
TEDAEEAKALAEEIDSLNKERQAIVSQMTEEAVEMVENDFPLNENAVLVIGKEGWNPGVV
GIVASRLVDKFYRPTIVLSFDSEKGTAKGSARSITGFDLFKNLSTCRDILPHFGGHPMAA
GMTLQLDDVAQFRNRLNELASTELTEDDLIPVTQLDASVTVDEISVESIEKLQLLAPFGM
HNPKPKWIIDSVSIEHYKKIGSAQNHLKLVLEDNGIQLDGVGFGLGELADHMTPFSNASV
IGELSINEWNNRKKPQLFLHDVKIEHWQLFDVRGIKQVHKWNGLIPEENKKIICFNPATL
EKLSLEKDEVILLEDGSSLEGLSTDKASLVLLDLPTSKPILEDLLKKGRPHRIYAHFFQE
EDHFFSTMPTRDHFKWYYGFLTKRGSFDLNKHGDDLAKYKGWSKETIDFMSQVFFDLKFV
TIVNGFISLNPAKTKKDLSESLTYQKKRQQYELENELLYSSYQELKTWFNERIEESVTIE
EEVKAWT
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgttaaactcgaaaacacgttggatgatgacagaatcagatcaacataaaatatcagaa
ctggcaaatgaattaaaagtaccttcgcttgtggcgaaattattaatcaaccgggacttg
gacgacgtagaagaagcccggaattttttatttgatacaggcgattcatttcacgatcca
tttttatttgaagatatgaagaaagcaacggaaagaatccataaagccattgaaaatggc
gaaaggattcttgtttatggggactatgacgctgatggtgtaagtagtacgtccgtattg
atgacagtgttaagggacatcggagcagatgtggaattctatatcccaaaccggttcagc
gaaggatacggtccgaatgaaggagcttttcgctgggcgaaggatgaagaattcacgctc
atcataaccgtcgatacgggaatatctgcagtgaacgaagcaaaattggcaaaagaactg
gagatcgatttgatcattacggatcaccatgaacctggaccggaattgcctccagccttt
gccttgattcatccaaaggtcgaagggactacctatccatttggagaattggcaggagtg
ggagtggcattcaaactggcacatgcactgtacggtgaacttcctacccacctgcttgat
ctagctgcgattggaaccattgccgatttagtgccgttaagaggagaaaatcgccttctg
gccaagcgtgggatttcccagctacgtgtttcaaaccgattgggaatcaaagcattatgc
cgaattgcaaatgctcaacaacaggaaatcacggaagaatccattgggttcatgattgct
ccccgtatcaatgcagtcggacggttaggggatgcagatcctgccgtcgatcttatgctc
acagaagatgccgaggaagcgaaggccctggctgaagaaattgacagcttgaataaagaa
agacaggcgatcgtgtctcaaatgaccgaagaagcggttgagatggtggagaatgatttt
cccctgaacgaaaacgctgtacttgtaatcggaaaagaaggctggaaccctggagtagtc
gggattgtagcttcacgcttagtcgacaagttttaccgtccgaccatcgtgcttagtttc
gattctgaaaagggaacggcaaagggatcggcaagaagtatcacagggttcgatttgttc
aagaatttatcaacctgccgtgatatccttccccattttgggggacatccgatggctgca
ggtatgaccttacagttagacgatgtagctcagttcagaaaccgattaaatgagttggct
tcgactgaattgacggaagatgaccttatacccgtcacacagcttgatgcttctgttaca
gtggatgaaatctctgtagagtcgattgaaaagcttcagcttctggcccctttcgggatg
cataatccaaaaccgaaatggatcatagacagtgtaagcatcgaacactataaaaaaatc
ggatctgcacaaaatcatttgaaactggtcctagaagacaatggcattcaattggacgga
gtcggttttggattgggagaactggcggatcatatgaccccattttcaaatgcctctgta
ataggtgagttatccataaatgaatggaataaccgcaagaagcctcaactatttttacat
gatgtgaaaattgagcattggcaattatttgatgtccgggggattaaacaagtccataaa
tggaatgggctcatacctgaagaaaataaaaaaatcatttgttttaatccggctacttta
gaaaagctgagtctggaaaaagatgaagtgatcctgcttgaggatggttcttcactcgaa
ggactttccaccgataaggcaagtttggtgcttctggatctgccgacttctaaaccaata
cttgaagatctcttgaagaaggggcggccgcaccggatttatgctcatttcttccaggaa
gaagatcattttttcagtacgatgccaacgcgtgaccatttcaaatggtactatggattt
ttaacaaagcgcggatcatttgatttaaataaacatggtgatgacctggcgaaatacaaa
ggctggtcaaaagaaacaatagatttcatgtcacaggtgttttttgatttgaagtttgtt
acaatagtgaatggatttatttctcttaatcctgctaaaaccaagaaagatctttctgaa
tctctcacatatcagaagaaacgacaacaatacgagctggaaaacgaattgttatattct
tcctatcaagagttgaagacttggtttaatgaaaggatagaagagtctgttacaattgag
gaggaagtaaaagcatggacttaa
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