Roseivivax sp. THAF197b: FIV09_03780
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Entry
FIV09_03780 CDS
T06253
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rot
Roseivivax sp. THAF197b
Pathway
rot00300
Lysine biosynthesis
rot00470
D-Amino acid metabolism
rot01100
Metabolic pathways
rot01110
Biosynthesis of secondary metabolites
rot01120
Microbial metabolism in diverse environments
rot01230
Biosynthesis of amino acids
Module
rot_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rot00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FIV09_03780 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FIV09_03780 (dapF)
Enzymes [BR:
rot01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FIV09_03780 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QFS81939
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Position
741717..742520
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AA seq
267 aa
AA seq
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MKMHGLGNDFVVLDGRARAIEVTPAMARALGDRHRGVGFDQLALIEARGPGDAHLTFYNT
DGSTSAACGNATRCIADFLMREAETTSLTLTTDRGSLAAERVAGGDVSVNMGPPQTDWAG
VPLAEAMDTLELPIEGAPTATGMGNPHCTFFVEDAEAVPLETFGPRYEHHPLYPERTNVQ
IAEVTGPDRIRMRVWERGVGVTLASGSSSCATAVAAARRGLTGRNVTIDLDGGTLRIDWR
DDGVWMTGGTAYVFDGVLTPAWLGRNT
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcacgggctcggcaatgattttgtcgtgctggacgggcgtgcgcgcgcgatc
gaggtcacgccggcgatggcgcgggcgctgggcgaccggcaccggggtgtcggcttcgat
cagctggccctgatcgaggcgcggggcccgggcgacgcgcatctgacattctacaacacc
gatggctcgacctcggcggcctgcggcaatgccacacgctgcatcgccgatttcctgatg
cgggaggccgagaccacatcgctgaccctcacgaccgatcgcggaagcctcgcggcggag
cgcgtcgcgggcggtgacgtgtcggtgaatatgggcccgccgcagacggattgggccggc
gtgccgctggccgaggcgatggatacgctcgaactgcccatcgagggcgcgcccacggcg
acgggcatgggcaatccccattgcaccttcttcgtggaggatgccgaggccgttccgctc
gagacattcggcccgcgctacgagcatcatccgctttaccccgagcgcaccaatgtgcag
atcgctgaggtcacggggccggaccgcatccgcatgcgggtctgggagcggggcgtgggc
gtcacgctcgcgtcgggctcctcgtcctgcgcgacagccgtggccgccgcgcggcgcggc
ctgaccgggcgcaatgtgaccatcgatctcgatggcggcacgctccggatcgactggcgc
gatgatggggtctggatgaccggtggcaccgcgtatgtcttcgatggtgtgctgacaccg
gcatggctggggcggaacacatga
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