Roseivivax sp. THAF197b: FIV09_04425
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Entry
FIV09_04425 CDS
T06253
Symbol
dnaX1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rot
Roseivivax sp. THAF197b
Pathway
rot03030
DNA replication
rot03430
Mismatch repair
rot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIV09_04425 (dnaX1)
03430 Mismatch repair
FIV09_04425 (dnaX1)
03440 Homologous recombination
FIV09_04425 (dnaX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rot03032
]
FIV09_04425 (dnaX1)
03400 DNA repair and recombination proteins [BR:
rot03400
]
FIV09_04425 (dnaX1)
Enzymes [BR:
rot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIV09_04425 (dnaX1)
DNA replication proteins [BR:
rot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIV09_04425 (dnaX1)
DNA repair and recombination proteins [BR:
rot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIV09_04425 (dnaX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_30
AAA_5
RuvB_N
AAA_22
AAA_19
AAA_16
AAA_14
AAA_24
Rad17
SLFN-g3_helicase
AAA_18
AAA_assoc_2
DUF815
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
QFS82067
LinkDB
All DBs
Position
complement(863700..865469)
Genome browser
AA seq
589 aa
AA seq
DB search
MNTAPSAYQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFIMTGIRGTGKTTTA
RIIAKGMNCIGPDGEGGPTTEPCGQCEHCVAIMEGRHVDVLEMDAASNTGVGDVREIIDS
VHYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSRC
QRFDLRRIEPEVMIALLRRIATGEGAEITDDALALITRAAEGSARDATSLLDQAISHGAG
ETTAIQVRAMLGLADRARVLDLFETIMKGDAAAALTELSAQYADGADPMAILRDLAEVTH
WISVVKITPEAAEDPTISPDERTRGQALAQTLGMRPLTRMWQMLLKALEEVSAAPNAMMA
AEMAVIRLTHVAELPSPEDLVRKLQAESPPPAPPGGGGGGGMTHAPAGGGAQAQGVPVPT
HRGPSGPSASHDGNAVRAVAKDDALARYPTFDHVLELIRANRDVKLLVEVEGGVRLAAYQ
PGRIEFTPTEDAAPDLAQRLGASLSRWTGNRWAVTLVNGCEAPTLVETRDADVLALREEA
ASHDMVRAVFDVFPKARILKVTTPEEEAQEAQAEALPEVEEEWDPFEDD
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagctccctccgcctaccaggtcctcgcccgcaaataccgccccgagaccttc
gccgacctcgtcgggcaggatgcgatggtgcgcacgctcaagaacgccttcgccgccgac
cgcatcgcgcaggccttcatcatgacgggtattcgcggcacaggcaaaaccaccacggcg
cggatcatcgccaagggcatgaactgcatcggccccgatggcgaaggcggccccacgacg
gaaccttgcggtcagtgcgaacattgcgttgcgatcatggaaggtcgtcatgtggacgtg
ctggagatggacgcggcgtcgaacacaggcgtcggcgatgtgcgcgaaatcatcgattcg
gtgcattaccgcgcagcctcggcgcgctacaagatctacatcatcgacgaagttcacatg
ctgtccacaagcgcgttcaacgcgcttctgaagacgcttgaggaaccgcccgcccacgtc
aaattcatcttcgccacgaccgagatccgcaaggtgccggtcaccgtcctgtcgcgttgc
cagcgcttcgatctgcgtcggatcgagcccgaggtgatgatcgcgcttctgcgccgcatc
gcgaccggcgaaggggccgagatcaccgacgatgcgctggccctcatcacgcgcgctgcc
gaaggatcggcccgcgatgcaacctcgcttctcgatcaggcgatcagccatggcgcggga
gagaccaccgccattcaggtgcgcgcgatgctggggctcgccgatcgtgcgcgcgtcctg
gacctcttcgagacgatcatgaagggcgatgcggcagcggcgctcacggagctgtcggcg
caatatgcagatggcgcggacccgatggcgatcctgcgggatctcgccgaggtcacgcat
tggatctccgtcgtgaagatcacgcccgaagcggcggaggaccccaccatttcgcctgat
gagcgcacccgcgggcaggccctggcccagacgctggggatgcggccgctcacgcggatg
tggcagatgctgctgaaggcgctggaggaagtctccgccgcgcccaacgcgatgatggcg
gccgagatggcggtgatccggctgacgcatgtggccgaactgccctcgcccgaggacctc
gtgcgcaagctgcaggccgaaagcccgccccctgccccgcccggcggcggcggaggtggc
ggcatgacccatgcgcccgcaggcggtggcgcgcaggcccagggcgtacccgtgcccacc
catcgcggaccctcggggccctcggcctctcatgacggcaatgcggtgcgcgcggtcgcc
aaagatgacgcgcttgcccgctatccgacatttgaccacgtgctcgagttgatccgtgcc
aatcgcgacgtgaagcttctggtcgaggtcgagggtggcgtgcggctcgcggcctatcag
cccggccggatcgagttcaccccgaccgaggatgccgcccccgatctggcgcaaaggctg
ggcgcgtccctgtcgcgctggaccggcaatcgctgggcggtgacgctggtgaacggctgc
gaggcgcccacgctcgtggagacgcgggatgccgacgtgctggcgctgcgcgaggaggcg
gcaagccatgacatggtgcgcgcggtcttcgacgtcttcccgaaagcgcggatcctcaag
gtcaccacgcccgaggaagaggcgcaggaagcacaggccgaggcattgcccgaggtcgag
gaggaatgggatcctttcgaggacgactga
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