Roseivivax sp. THAF197b: FIV09_07380
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Entry
FIV09_07380 CDS
T06253
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rot
Roseivivax sp. THAF197b
Pathway
rot03410
Base excision repair
rot03430
Mismatch repair
rot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIV09_07380 (recJ)
03430 Mismatch repair
FIV09_07380 (recJ)
03440 Homologous recombination
FIV09_07380 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rot03400
]
FIV09_07380 (recJ)
DNA repair and recombination proteins [BR:
rot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FIV09_07380 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FIV09_07380 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FIV09_07380 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF1799
Motif
Other DBs
NCBI-ProteinID:
QFS82645
UniProt:
A0A5P8YZ48
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All DBs
Position
1472723..1474480
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AA seq
585 aa
AA seq
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MSYLGVERSLTGRRWVGPAPDVQRAAEAMAQSTGLASAICATLARLGIAAEDAVAFLDPK
LRDLLPDPRSLRDMEKAAARVLQSVSQSERVAVFADYDVDGGASAALLIDWFRQQGRSVT
LYIPDRIDEGYGPNVPAMRDLAARHDLIICVDCGTLSHDPIAAASDVADVVVLDHHLGGE
VLPPAHAVVNPNRQDEDGALAHLCAAAVVFLMLVECGRQMRAAGQAGPDLMAMLDLVALA
TVADVAPLRGVNRALVRQGLQVMARRARPGVVALSDIARLETAPSSYHLGYVLGPRVNAG
GRIGAADLGARLLATQDVHEAAALAERLDHLNTERREIEAAVRATAMAQAEERGLDAPLV
WAAGEGWHPGVVGIVAARLKEATNRPAIVIGLEGDEGKGSGRSIAGVDLGASIQKLAAEG
LLLKGGGHKMAAGLTVARDGIDAAMSRLTELLAKQGAGTGGAADLRLDSLLMPGAATPEL
IEALEAAGPFGAGAPAPRYAFPDAQIDFCKEVGTGHLKLGIGDGMGARLDAICFGAFDSP
MGAALSQHKGARFHLAGRLEINEFRGRRSVQLRLEDAAPAASENS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
ttgagttacctgggtgtcgaaagatccctgaccggtcggcgctgggtcggccccgcgcct
gacgtgcagcgcgccgccgaggccatggcccagtcgacgggcctcgcatcggcgatctgt
gccacgctcgcgcggctcggcattgcggctgaagatgcggtggccttcctcgaccccaaa
ttgcgcgacctgctgcccgacccgcgatccctgcgcgacatggagaaggcggcggcgcgg
gttctgcaatctgtatcgcagtccgagcgcgtggcggtcttcgcggattacgatgtggat
ggcggtgcgtcggctgcgctgctgatcgactggttccggcagcaggggcggtcggtcacg
ctctatatccccgacaggatagacgaaggctacggtccgaacgtgcccgcgatgcgcgat
ctggccgcgcggcacgatctcatcatctgtgtcgattgcgggaccctgtcgcatgatccg
attgctgcggcgtcggacgtggcggatgtggtcgtgctcgatcaccaccttggcggcgag
gtgctgccgcccgcccatgcagtcgtgaacccgaaccggcaggatgaggacggcgcgctt
gcgcatctctgcgcggcggcggtcgttttcctgatgctggtcgaatgcggacgtcagatg
cgcgcggcggggcaggcggggcctgacctcatggcgatgctcgatctcgtggcccttgcg
accgtggccgatgtggctcccttgcgcggggtgaaccgggcgcttgtgcggcaaggtctg
caggtcatggcgcggcgcgcgcggcccggggtcgtcgcgttgagcgacattgcccgcctg
gagacggcaccttcctcctaccatctgggctatgtgctcggtccccgcgtgaatgcgggc
gggcggatcggggccgcggatctcggtgcccgccttctcgccacgcaggatgtgcacgag
gccgccgctctggcggagcgtctcgatcacctcaatacggagcggcgcgagatcgaagcg
gccgtgcgtgccacggccatggcccaggcggaagagcgcggtctcgatgcgccgctggtc
tgggctgcgggcgagggctggcatccgggcgtggtcggcattgttgccgcgcgcctcaag
gaggccacgaaccggcctgccatcgtcatcggtctcgaaggcgacgaggggaaaggctcc
gggcgctccattgccggtgtcgatctcggggcgagcattcagaaactggccgccgaaggg
ctgctgctgaaaggcggagggcacaagatggccgccggtctgaccgtggcgcgggacggg
attgatgccgcgatgtcccgcctgaccgagcttttggcaaaacagggggcagggacgggc
ggtgctgccgatctgcgtctcgacagtcttctcatgcccggcgctgcgacgccggaattg
atcgaggcgctggaggcggcggggcccttcggagcaggtgcgcccgcgccgcgctacgcc
tttcccgatgcgcagatcgatttctgcaaggaggtcggcaccgggcacctcaagctcggg
atcggagacggcatgggcgcgcgcctcgatgcgatctgcttcggtgcgttcgacagcccg
atgggagccgcgctgtcccagcacaagggcgcgcgtttccatcttgcagggcgtctcgag
atcaatgaattccgcgggcggcgcagcgttcagctccgtctggaagatgccgcacccgct
gcgagcgaaaattcctga
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