KEGG   Roseivivax sp. THAF197b: FIV09_10275
Entry
FIV09_10275       CDS       T06253                                 
Symbol
nrdJ
Name
(GenBank) Vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rot  Roseivivax sp. THAF197b
Pathway
rot00230  Purine metabolism
rot00240  Pyrimidine metabolism
rot01100  Metabolic pathways
rot01232  Nucleotide metabolism
Module
rot_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
rot_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:rot00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    FIV09_10275 (nrdJ)
   00240 Pyrimidine metabolism
    FIV09_10275 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rot03400]
    FIV09_10275 (nrdJ)
Enzymes [BR:rot01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     FIV09_10275 (nrdJ)
DNA repair and recombination proteins [BR:rot03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    FIV09_10275 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TACO1_YebC_N DUF4695
Other DBs
NCBI-ProteinID: QFS83211
UniProt: A0A5P8Z2K9
LinkDB
Position
complement(2064832..2068503)
AA seq 1223 aa
MKIDRHYTKAGQDAYEGISFVTTASEIRNPDGTIVFRLDDIEVPASWSQVASDVIAQKYF
RKAGVPVELKRVEEAGVPEFLWRSVPASKDTERTGETSSKQVFDRLAGAWCYWGWKGGYF
TTEEDARAYYDEMRHMLATQTAAPNSPQWFNTGLHWAYGIDGPGQGHYYVDYKTGKLTKS
KSAYEHPQPHACFIQSVADDLVGDGGIMDLWVREARLFKYGSGTGTNFSSLRGEGEKLSG
GGKSSGLMGFLKIGDRAAGAIKSGGTTRRAAKMVICDADHPDIEEFINWKVKEEQKVASI
VAGSKMHEQMLNGIFGAIASFDGSAEGAYDPKTNPSLKEAIRAAKKVQIPETYVKRVLDY
AKQGYTSIEFPTYDTDWDSEAYASVSGQNSNNSIRVTDAFLKAVKDDADWELYNRTDGSV
AKTIKARDLWEQVGHAAWACADPGIQFHDTVNAWHTCPEDGAIRGSNPCSEYMFLDDTAC
NLASMNLLTFLKDGKFDAETYMHATRLWTLTLEISVTMAQFPSKEIAQLSYDFRTLGLGY
ANIGGLLMNMGYSYDSDEGRALCGALTAIMTGVSYATSAEIAGELGAFSGYERNKAHMLR
VIRNHRNAAYGATTGYEKLAVKPVPLDHGNCPDQGLVDLAMSTWDQALKLGEAHGYRNAQ
TSVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRSVPAALEKLGYSSAHI
EEIVSYAVGHGSIGNAPGINHTSLVGHGFGPAQLEKVDGALASAFDIRFVFNQWTLGEEF
CREVLGIPAAKLNDPSFDLLRHLGYTKAEIEAANDHVCGTMTLEGAPHLKEEHYAIFDCA
NPCGKKGKRFLGVDSHIKMMAAAQSFISGAISKTINMPNDATIEDCQRAYELSWSLGTKA
NALYRDGSKLSQPLASALVEDDDEAAEILESGSVQEKAAVLAEKVVEKIVIKEVEKATAR
EKMPERRKGYTQKAIVGGHKVYLRTGEYADGSLGEIFIDMHKEGAGFRAMMNNFAIAVSV
GLQYGVPLEEFVDAFTFTKFEPAGMVQGNDSIKNATSILDYIFRELAVSYLDRTDLAHVK
PEGATFDDIGRGEEEGVSNVKEISESAASKSLEVLKQISSSGYLRKRVPQELVVLQGGQA
TAFAAPDNASAALTTLMPETTTTTTTVAMKSETTSTSGGMDASAKARMQGFEGEACGECG
NYTLVRNGTCMKCNTCGGTSGCS
NT seq 3672 nt   +upstreamnt  +downstreamnt
atgaagatcgatcgtcactacacgaaagccggacaggacgcttacgaaggcatttcgttt
gtcaccacggcgtccgaaattcgcaatccggacggcacgatcgtcttccgcctggacgac
atcgaggttcccgcctcctggagccaggtcgcctccgacgtgatcgcgcagaaatacttc
cgcaaggcaggcgtgcccgtcgagctgaagcgcgtcgaagaggcgggagtcccggaattc
ctgtggcgctccgtgcccgcgtcgaaggacaccgagcgcaccggtgagacctcctcgaag
caggtcttcgaccgtcttgcaggcgcctggtgttattggggctggaaaggtggctacttc
accaccgaagaggacgcgcgcgcctattacgacgaaatgcgccacatgctggccacgcag
acggccgcgccgaactcgccccagtggttcaacaccggcctgcattgggcctacggcatc
gacggtcccggtcagggccactactacgtggattacaagaccggcaaactgacgaagtcg
aagtcggcctatgagcatccgcagccccatgcctgcttcatccagtccgtcgcagacgat
ctggtgggcgatggcgggatcatggatctctgggtccgcgaggcgcgcctgttcaagtac
ggctccggcaccggcaccaacttctcctcgctccggggcgagggcgagaagctgtcgggc
ggcggcaagtcctcgggcctgatgggcttcctgaagatcggcgaccgcgcggcgggtgcc
atcaagtcgggcggcaccacgcgtcgcgcggccaagatggtgatctgcgacgccgatcac
ccggacatcgaggaattcatcaactggaaggtcaaggaagagcagaaggtcgcgtccatc
gtcgcgggctccaagatgcacgagcagatgctcaacggcatcttcggggccatcgcgtcc
ttcgacggctccgccgagggggcatatgacccgaaaacgaacccgtccctgaaagaggcg
atccgcgccgccaagaaggtccagatccccgagacctacgtgaagcgcgtgctcgattac
gccaagcagggctacacctcgatcgaattcccgacctatgacaccgattgggactccgag
gcctacgcctcggtctcgggccagaactccaacaactcgatccgtgtgaccgacgccttc
ctcaaggccgtcaaggacgacgccgattgggagctttacaaccgcaccgacggttcggtc
gccaagaccatcaaggcgcgcgatctgtgggagcaggtgggccacgcggcctgggcctgc
gctgacccgggcatccagttccacgataccgtcaatgcctggcacacatgccccgaagac
ggcgcgatccgcggctcgaacccgtgctcggaatacatgttcctcgacgacacggcctgc
aacctcgcctcgatgaacctgctcacgttcctcaaggacggcaagttcgacgcagagact
tacatgcacgccacgcgtctgtggaccctgacgctcgagatctcggtgaccatggcgcaa
ttcccctcgaaggagatcgcgcagctttcctacgatttccgcacgctggggcttggctac
gccaatatcggcggtctgctgatgaacatgggctattcctatgacagcgacgagggccgc
gcgctttgcggtgcgctgaccgccatcatgacgggtgtgtcctacgcgacctccgccgag
atcgcgggcgagctcggcgccttctcgggctatgagcgcaacaaggcgcatatgctgcgc
gtcatccgcaaccaccgcaacgcggcctatggtgctaccaccggctacgagaagctcgcc
gtgaagcccgtgcccctcgatcatggcaactgccccgatcagggcctggtggacctcgcg
atgtcgacctgggaccaggccctgaagctgggcgaggcgcatggttaccgcaacgcgcag
acctccgtgattgcgcccaccggcacgatcggtctcgtgatggattgtgacacgaccggg
atcgagcccgacttcgcgctggtgaagttcaagaagctcgcaggcggcggttacttcaag
atcatcaaccgctcggtgcccgcggcgctcgagaagctcggttattcctccgcgcatatc
gaggagatcgtctcctacgccgtgggccacggctccatcggcaacgcgcccggcatcaac
cacacctcgctcgtcggtcacggcttcggccccgcgcagctggaaaaggtggacggcgcg
ctggcctcggccttcgacatccgcttcgtcttcaaccagtggaccctgggcgaggaattc
tgccgcgaagtgctgggcatcccggccgccaagctgaacgatccctccttcgatctgctg
cgtcacctgggctacacgaaggccgagatcgaggctgccaatgaccatgtctgcggcacc
atgaccctcgaaggcgcaccgcacctcaaggaagagcattacgcgatcttcgattgcgcc
aacccctgcggcaagaagggcaagcgcttcctcggtgtcgacagccacatcaagatgatg
gccgcggcgcagagcttcatttcgggcgcgatctccaagacgatcaacatgcccaacgac
gccacgatcgaggattgccagcgcgcctatgagctctcctggtcgctcggcacaaaggcc
aacgcgctctaccgcgacggctccaagctgagccagcccttggcctccgcgcttgtcgag
gatgacgacgaagccgccgagatcctggaatcgggctcggtccaggaaaaggccgccgtg
ctggccgagaaggtggtcgagaagatcgtcatcaaggaggtcgagaaggccaccgcgcgc
gagaagatgcccgagcgccgcaagggctacacccagaaggccatcgtcggcgggcataag
gtctacctgcgcaccggcgaatatgccgatggctcgctcggcgaaatcttcatcgacatg
cacaaggaaggtgcgggtttccgggcgatgatgaacaacttcgccatcgcggtctccgtg
ggccttcagtatggcgtgccgctggaggagttcgtcgacgccttcacattcaccaagttc
gagcctgcgggcatggtgcagggcaacgactcgatcaagaacgcgacctcgatcctcgac
tacatcttccgcgaactggccgtgtcctatcttgaccgtaccgatctggcgcatgtgaag
cccgaaggggccaccttcgacgatatcggtcgcggcgaggaagagggcgtgtccaacgtc
aaggagatctccgaaagcgccgcgtccaaatcgctcgaagtgctcaagcagatcagctcg
tcgggctacctgcgcaagcgcgtcccgcaggagctggtggtgcttcagggcggtcaggcc
acggctttcgccgcgccggataatgcctccgcggcgctgaccacgttgatgcccgagacg
acgaccacgaccaccacggtcgccatgaagtccgagaccacgtccacgtcgggcggcatg
gacgcctccgccaaggcccggatgcagggcttcgagggcgaggcctgcggcgagtgcggc
aactacacgctcgtgcgcaacggcacctgcatgaagtgcaatacctgcggcggcacgtcg
ggctgtagctga

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