Roseivivax sp. THAF197b: FIV09_10335
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Entry
FIV09_10335 CDS
T06253
Symbol
rnd1
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rot
Roseivivax sp. THAF197b
Brite
KEGG Orthology (KO) [BR:
rot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rot03016
]
FIV09_10335 (rnd1)
Enzymes [BR:
rot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FIV09_10335 (rnd1)
Transfer RNA biogenesis [BR:
rot03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FIV09_10335 (rnd1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QFS83222
UniProt:
A0A5P8Z2F6
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All DBs
Position
complement(2077890..2079053)
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AA seq
387 aa
AA seq
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MQTITRTEELAAFCARAHDAPYVTVDTEFLRERTYYSKLCLVQLALPHEGEGDGDAVLVD
PLSADLSLDPLVALFRDTSVVKVFHAARQDLEIFSIEFGVIPEPLFDTQVAAMVCGFGEQ
VGYETLVKRIARASLDKSSRFTDWSRRPLTDAQKTYALADVTHLRKIYEFLEKKLRDTGR
HRWVAEELALLGDPATYVTHPEDAWRRVKTRNTSPRFLAILRELAAFREAYAQGRNVPRN
RVYKDDALVELAATKPANFEDLGRSRLLLREARKGEIAQGILDAVARGQAMPKEELPKVE
NGPDKGQVNPALADLLRVLLKARTESSGVAPKLIAPSSDLDALASGARDVAALKGWRREV
FGEDALRLCEGRIALTADGTKVSVIEL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgatcacccggaccgaagaactggcggcattctgcgcccgcgcccatgacgcg
ccctatgtgacggtcgataccgagtttctgcgagagcggacatattactccaagctgtgc
ctcgtgcagcttgccctgccgcatgagggcgaaggcgacggcgatgcggtcctggtcgat
ccgctttctgcggatctgtcgcttgatccgctggtggcgctctttcgcgacacctcggtc
gtcaaggtgttccacgccgcgcgtcaggatctcgagatcttctcgatcgagttcggtgtc
atccccgagccgcttttcgatacgcaagtagcggcgatggtctgcggtttcggcgaacag
gtgggctacgagacgctcgtgaagcggatcgcgcgcgcaagcctcgataaatcctcgcgg
ttcaccgactggtcgcgccgaccgctgaccgacgcgcagaagacctatgcgctggccgat
gtgacccatctgcgcaagatctacgaattccttgaaaagaagctgcgcgataccgggcgc
caccgctgggtggcggaggaactggcgctcctgggcgatcccgcaacctatgtgacccat
cccgaggatgcctggcgccgggtcaagacccgcaataccagcccgcgtttcctcgccatt
ctgcgcgagttggccgcgttccgtgaagcctacgcgcaagggcgcaacgtgccgcgcaac
cgggtctacaaggacgatgcgctggtggagcttgccgcgacgaagcccgccaatttcgag
gatctcggccgctcgcgcctgttgctgcgcgaggcgcggaaaggcgaaatcgcgcaaggg
atcctcgatgcggtggcccgcgggcaggccatgcccaaggaggagctgcccaaggtcgag
aacggtcccgacaagggacaggtgaacccggcgctggccgatctcctgcgggtgcttttg
aaggcgcgcacggaaagctcgggcgtggcgccgaaactgattgcgccctcctccgatctc
gatgcgctggccagcggcgcgcgcgatgtggcggcgctaaagggctggcggcgcgaggta
ttcggcgaagacgcgctgcggctctgcgaggggcgaatcgcactgaccgccgatggcacg
aaggtctccgtgatcgaactttga
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