Roseivivax sp. THAF197b: FIV09_11895
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Entry
FIV09_11895 CDS
T06253
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rot
Roseivivax sp. THAF197b
Pathway
rot03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIV09_11895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rot03400
]
FIV09_11895
Enzymes [BR:
rot01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FIV09_11895
DNA repair and recombination proteins [BR:
rot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FIV09_11895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QFS83532
UniProt:
A0A5P8Z3A3
LinkDB
All DBs
Position
complement(2419048..2420532)
Genome browser
AA seq
494 aa
AA seq
DB search
MYEVVLPRIGTVAAWRAEARRLARAGIPPEAVLWRRGGQAPDLFAGAPVVAEGTARDIRL
SKIAIDGIESALYHTDPERFARAYRTVLRLSAGAVQWGDRSDADVAKLLAQGKAIGRDVH
KMHAFVRFREVEAQGPRRAFAAWFEPEHPCLERGAPFFAKRFGDMDWVIATPDLTARFED
GKLRYEETEAPERPPEDATEDLWRTYYASIFNPARVMVKAMCAEMPKKYWKNLPEAELIP
GLIEGAEARVRAMAETMPVLEPDRRARALSDHAARVLAKPAPEGPVATLAEEVRGCTRCD
LCHHATQAVPGQGPREARVMIVGEQPGDQEDLRGQPFVGPAGQVFDRAAGAAGLDRQAAF
ITNAVKHFKFQARGKRRIHQRPDAGEVEACRWWLDLERELVRPELIVAMGATAAEALTGE
GRHLTRRRGRIETLTDGTPVLITWHPSYILRLPDADARARAEAELVGDLTIARQMGEAGA
LGAAGAQIATIRER
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaggtggtgctgccccggatcggcacggtcgcggcctggcgggccgaggcgcgc
aggcttgcccgtgccggtatcccgcccgaggcggtgctgtggcggcgcggcgggcaggcg
ccggatctcttcgcgggcgcgccggtcgtggccgagggcacggcgcgggacatccgcctg
tcgaaaatcgccatcgacgggatcgaaagcgcgctctaccacaccgatcccgaacgcttc
gcaagagcctatcgcacggtactgcggctcagcgcaggcgcggtgcaatggggtgaccgc
agcgatgcggatgtcgcgaaactgctggcgcagggcaaggccatcgggcgcgacgtgcac
aagatgcacgccttcgtgcgcttccgcgaggtggaggcgcaggggccgcgccgggccttc
gccgcgtggttcgagcccgagcatccctgcctggaacgcggtgcgccgttctttgccaaa
cgcttcggcgatatggattgggtgatcgccacacccgacctgaccgcgcggttcgaggat
ggcaaattgcggtacgaggaaacggaggcgcccgaacgcccacccgaagacgcgaccgag
gatctgtggcgcacctattacgcgtcgatcttcaatcccgcgcgggtaatggtgaaggcg
atgtgcgccgagatgcccaagaaatactggaagaacctgcccgaggcggagctgatcccg
ggccttatcgaaggggccgaggcccgcgtgcgcgccatggccgagacgatgccggtgctg
gagcctgaccgccgggcacgagcgctctccgatcatgcggcgcgggtgctggcaaagccc
gcgcccgaaggcccggtcgccaccttggccgaggaggtgcgcggctgcacgcgctgcgat
ttgtgtcatcacgcgacgcaggccgtgccggggcaggggccgcgggaggcgcgggtgatg
atcgtgggcgaacagcccggcgatcaggaagatctccgtggtcagcccttcgtgggacct
gcggggcaggtcttcgaccgggccgcaggggccgcagggctcgaccgccaggcggcgttc
atcaccaacgcggtcaagcatttcaaattccaggcgcgcggcaaacggcgcatccaccag
cgtcccgatgcgggcgaggtcgaggcctgtcgctggtggctcgatctcgaacgcgaactc
gtgcggcccgagctgatcgtcgcgatgggtgccaccgctgccgaggcgctgacgggcgaa
gggcggcacctcacccggcgcaggggccggatcgagacgttgacggacggcacgccggtt
ctgatcacctggcatccctcctacatcctgcgccttcccgatgccgacgcccgcgcccgt
gcggaggcggaactggtcggtgatctgaccatcgcacgccagatgggagaggcgggtgca
cttggcgcggcgggcgcgcagatcgccacgatacgtgagcggtaa
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