Roseivivax sp. THAF197b: FIV09_12785
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Entry
FIV09_12785 CDS
T06253
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rot
Roseivivax sp. THAF197b
Pathway
rot02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rot00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIV09_12785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rot02000
]
FIV09_12785
Transporters [BR:
rot02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FIV09_12785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
QFS83705
LinkDB
All DBs
Position
complement(2622366..2623529)
Genome browser
AA seq
387 aa
AA seq
DB search
MNQADFTRRQLMALMGAAAAAGAVGMPARAQEALKLWAPGIAKVGAQDWSDMEGQSGIGI
NAIAKSARADESIQKMVVGDGNALYDAMTDNGGGMEDALASQGAIVPLDTSKIPNWANIL
PSYQEGGMSADTIRYDGQVVAVPYISNADSLAFNYGEIGEELTSWEALFDSQFRGRAAMQ
NDFGPTLTNTAIYLKQSGKGSIDNPSDMSEDEVRQTCEFLIDLKKKGHFRTFWDGVQNGA
DLLSSEEVLVSSCWEVIQIFAARKNGQDIRYGTMKEGHQSWNNVVMLTRGGQERGMEEAF
YSLANVYLSPWFGAQTLAGLGFTPQMEGVQHYVDANPDMFDDDTKAIMAERLERKQARRA
VAGNSWQNVFPTNIRAYQDWWARVQAA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagcagacttcacccgccgacagctcatggccttgatgggcgccgcggccgcc
gcaggcgcggtcggcatgccggcccgcgcgcaggaggcgctcaagctctgggcgccgggc
atcgccaaggtcggtgcgcaggattggtccgacatggaagggcagtccgggatcggcatc
aacgccatcgccaaatccgcccgcgcggacgagtcgatccagaagatggtcgtgggcgat
ggcaacgcgctttacgacgccatgaccgacaatggcggcggcatggaggatgcgctggcg
agccagggcgcgatcgtcccgctcgatacctcgaagatcccgaactgggcgaacatcctg
ccgagctaccaggagggcggcatgtccgccgacacgatccgctatgacgggcaggtcgtc
gcggtgccctatatctcgaacgccgacagccttgccttcaactacggcgagatcggcgag
gagctgacttcttgggaggcgcttttcgacagccagttccgcggccgtgcggccatgcag
aacgatttcggcccgacgctcacgaacaccgcgatctacctcaagcaatcgggcaagggc
tcgatcgacaacccgtcggacatgtccgaggacgaggtgcgccagacctgcgaattcctc
atcgacctcaagaagaagggccatttccgcaccttctgggatggtgtgcaaaacggcgca
gaccttctgtcatccgaagaggtgttggtcagctcgtgctgggaggtcatccagatcttc
gctgcccgcaagaacgggcaggacatccgctacggcaccatgaaggaaggccatcagagc
tggaacaacgtcgtcatgctgacccgcggcggacaggagcgcgggatggaggaggccttc
tacagcctcgccaacgtgtacctctcgccctggttcggcgcgcagacgctcgcgggcctc
ggcttcaccccgcagatggagggcgtgcagcactacgtggatgccaatcccgacatgttc
gacgatgacaccaaggccatcatggccgagcggctggagcgcaagcaggcccgccgcgcg
gtcgcgggcaattcctggcagaacgtcttccccacgaacattcgcgcctaccaggattgg
tgggctcgggtgcaggcggcctga
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