Roseivivax sp. THAF197b: FIV09_16330
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Entry
FIV09_16330 CDS
T06253
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rot
Roseivivax sp. THAF197b
Brite
KEGG Orthology (KO) [BR:
rot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rot03016
]
FIV09_16330 (truB)
Enzymes [BR:
rot01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FIV09_16330 (truB)
Transfer RNA biogenesis [BR:
rot03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FIV09_16330 (truB)
Prokaryotic type
FIV09_16330 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF4945
Motif
Other DBs
NCBI-ProteinID:
QFS84405
UniProt:
A0A5P8Z476
LinkDB
All DBs
Position
complement(3373927..3374838)
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AA seq
303 aa
AA seq
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MGRARKGRDVAGWLVVDKPAGLTSTAVVNKVRWALSAKKAGHAGTLDPDATGVLAVALGE
ATKTVPYITDALKAYRFTVRLGQATNTDDAEGEVIATSDLRPSDAEIKEALHGFVGEIMQ
IPPQYSAVKIDGERAYKRARDGETMEIAARPLWVEELVMTGREDADHVTLEMTCGKGGYV
RSVARDLGAALGCRGHVRELRRLWSGPFDAADGISLEEIERLAKDPALDAHLLPIEAGLT
DLPELRCAAAEANRIRNGNPGAVAASDLDYGEECWASCDGVPVAVGRYRAGTFHPDRVFV
TPT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcgcacgcaagggtcgggatgtggcgggctggctcgtcgtcgacaagcccgcc
gggctgacatcgacagccgtggtcaacaaggtgcgctgggcgctgtcggcgaaaaaggcg
ggccatgcgggcacgctggatccggatgcgacaggcgtgctggccgtggcccttggcgag
gccaccaagaccgtcccctacatcaccgatgcgctgaaggcctaccgcttcaccgtccgg
ctgggccaggcgaccaacaccgacgatgccgagggcgaggtgatcgcgacctccgatctg
cgcccctccgatgccgagatcaaggaagccctgcacggtttcgtgggcgagatcatgcag
atcccgccgcaatattccgcggtgaagatcgacggcgaacgcgcctataaacgcgcccga
gacggcgagacgatggagattgccgcccgcccgctctgggtcgaggagctggtgatgacc
gggcgcgaggacgccgatcacgtcacgctcgaaatgacctgcggcaagggcggctatgtg
cgctccgtggcgcgcgatctgggcgcggcgctgggctgtcgcggccatgttcgcgagctg
cggcgcctctggtccgggcccttcgatgccgcggacggcataagccttgaggagatcgag
cgcctggcgaaagatcctgccctcgacgcgcatctcctgcccattgaggcaggcctcacc
gatctgccggaactgcgctgcgccgcggccgaggccaatcgcatccgcaacggcaatccc
ggcgcggtggcggcctccgatctcgactacggcgaggaatgctgggcctcctgcgacggc
gttcccgtggctgtcgggcgctaccgggccgggactttccaccccgaccgggtcttcgtc
accccgacctga
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