Roseivivax sp. THAF197b: FIV09_17900
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Entry
FIV09_17900 CDS
T06253
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
rot
Roseivivax sp. THAF197b
Pathway
rot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FIV09_17900 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rot03400
]
FIV09_17900 (mutS)
DNA repair and recombination proteins [BR:
rot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FIV09_17900 (mutS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
MutS_C
AAA_27
Motif
Other DBs
NCBI-ProteinID:
QFS84717
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Position
3715357..3717999
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AA seq
880 aa
AA seq
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MNAVTPMMAQYLEIKAGHPDALLFYRMGDFYELFFDDAAAAAEALDIALTKRGKHDGNDI
PMCGVPVHSAEGYLLTLIRKGFRVAVCEQMESPAEAKKRGSKSVVKREVVRLVTPGTLTE
ESLLEARRHNYLAALGQVRDAFALAWADISTGAFHVMPIPAARIGAELARLAPAELLLSE
ASEDTQRPVLSDLGLEPTILSRGSFDSSAGDARLTALFGVATLEPFGDFNRAELSAMGAL
VDYLEITQKGKLPLLRPPRQDQVSRLLQIDAATRTNLELTRGADGSRAGSLLSVIDKTTT
AAGARLLERRLSSPSQNLDDITARHDAVAWSLENANAALSLRESLRKVPDLDRALSRLAL
DRGGPRDLSAVRAALTQAESLAASLENAELPDLLAEAQQALTGHDTLLALLDEALIAEPP
LLARDGGFIAEGFDADLDEARTLRDEGRGVIARMQSDFIEQTGIGSLKIKHNNVLGYFIE
TTATHATKMMAPPHSEVFIHRQTTANQVRFTTVELSELETRILNAGGRALEIEKRIYDTL
KAAILENAPALSSLALGLAEFDVALSMGTLAREEDWVRPKVDDSRAFVIEGGRHPVVERA
LRAQGGAPFIANDCTLSPEHDGPALELLTGPNMAGKSTYLRQNALIAILAQMGGYVPAAH
AHIGCVSQIFSRVGASDDLARGRSTFMVEMVETAAILNQADTRALVILDEIGRGTATYDG
LSIAWATLEHLAEVNRVRGLFATHYHEMTALAGKLPGVSNATVAVKEWDGEVIFLHEVRP
GAADRSYGVQVAQLAGLPPAVVARAKSVLDALEKGERDKASPKALIDDLPLFSVAAQAPT
PKAEAAPSEVEARLRDLSPDDMSPREALEALYQLRGLVRD
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgtgacgccgatgatggcgcaatatctcgagatcaaagccggacatcccgat
gcgctcttgttctatcgcatgggcgatttctacgagctgttcttcgacgatgcagccgcc
gccgccgaggcgctggatattgcgctcacgaaacgcggcaagcatgacggcaacgatatc
cccatgtgcggcgtgcccgttcattccgccgagggttatctgctgacgttgatccggaaa
gggtttcgcgtcgcggtctgtgaacagatggaaagccccgctgaggccaagaagcgcgga
tcgaaatctgtcgtgaagcgggaagtcgtgcgcctcgtgacgcccggcaccctgacggag
gaaagcctgctcgaggcaaggcggcacaattatctggccgctttgggccaggttagagac
gcttttgcattggcttgggcagacatctccaccggtgcgtttcacgtgatgcccatcccc
gcggcccggatcggagcagagcttgcgcggctcgcacccgctgaattgctgctttcggaa
gcgagcgaagatacccaacggccggtcctgtccgatctcggattggagcccacgatcctg
tcgcgcggctcattcgattccagcgcaggtgatgcacggctcaccgcgcttttcggggtc
gcgacattggagccattcggcgatttcaatcgggccgaattgtccgccatgggggcgctc
gtcgattatctcgagattacgcagaagggaaaactgccgcttctcaggccgccaaggcag
gaccaggtgtcgcgtctgttgcagatcgatgcggcgacgcggaccaaccttgaacttaca
cgcggcgcggacggctctcgcgcgggatcgcttttgtccgtgatcgacaagacaaccaca
gccgccggggcacgcctgcttgaacggcggctgtcgtcgcccagccagaacttggacgac
ataaccgcccgccacgatgcggtggcgtggagccttgagaacgcaaatgcggctctgtcc
ctgcgcgaaagcctgcgcaaggtgccggatctcgaccgcgccctgtcccgtctagcgctt
gatcggggcggaccgcgagacctgagcgcggtgcgcgctgcgttgacgcaggccgaaagc
ctggccgcctcgctggaaaatgccgaacttccggaccttcttgccgaggcgcagcaggcg
ctgaccggtcacgatacgcttctggcgctcctcgacgaggcgctgatcgcggagccgccg
cttttggcacgggacggtggcttcatcgcggaaggcttcgatgccgatctcgacgaggcg
cggacgctgcgcgacgaggggcgcggtgtcatcgcgcgtatgcaatccgatttcatcgag
caaaccggcatcggatcgctgaagatcaagcacaacaacgtccttgggtatttcatcgaa
acgacggcgacccatgcgacgaagatgatggccccgcctcattcggaggtgttcatccac
cgccagacaacggccaaccaggtgcggttcaccaccgtggaattgtccgagctggaaacg
cggatcctgaatgcgggcggacgggcgctggagatcgaaaagcggatctatgacaccctg
aaagcggccattcttgagaatgcccctgccctgtcgtccctcgccttgggtcttgcggaa
ttcgatgtcgccctgtcgatgggcacgcttgcgcgggaagaagactgggtccgtccgaag
gtcgatgacagccgcgctttcgtcatcgaagggggccggcatccggtggtcgaacgcgcg
ctacgcgcacagggcggcgcacccttcatcgccaatgattgcaccctgtcgcccgaacat
gacggaccggcgcttgagcttctgacaggcccgaacatggccggtaaatcgacctatttg
cggcagaacgcgctgatcgcgatcctggcgcaaatgggggggtatgtgcccgcggcgcat
gcgcatatcggctgcgtcagccagattttcagccgcgtcggggcttcggacgatctggcg
cggggtcgttccacattcatggtggagatggtagaaaccgcggccattctgaaccaggcc
gatacgcgggccttggtcatcctggacgagatcgggcgtggaacggcgacctatgacggc
ctgtccatcgcgtgggcgacactggagcatctggcggaggtcaaccgggtccgcggtctg
ttcgccacgcattatcacgagatgactgcactggcagggaagctgcccggcgtgtcgaac
gcgacggtcgcggtcaaggaatgggacggcgaggtgatcttcctgcacgaggttcgcccc
ggtgcagcggatcgctcttacggggttcaggtggcgcagcttgcgggccttccgcctgcc
gtcgtggcccgcgcgaaatccgtgcttgatgcgctggaaaaaggcgaacgggacaaggcg
tcgcccaaggccctgatcgatgacctgcccctgttctcggtcgcagcccaagcgcccacc
cccaaagcagaagccgcgccgtccgaggtggaggcgcggcttcgagatctgtcgccggac
gatatgagcccgcgagaggcgctggaggcattataccaactgcgcggactcgtgcgggat
tag
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