Rahnella sikkimica: BV494_00395
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Entry
BV494_00395 CDS
T05331
Name
(GenBank) two-component system response regulator GlrR
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
rox
Rahnella sikkimica
Pathway
rox02020
Two-component system
rox02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BV494_00395
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BV494_00395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rox02022
]
BV494_00395
Two-component system [BR:
rox02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
BV494_00395
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA_2
AAA_16
AAA
HTH_8
Glycos_transf_1
UPF0175
AAA_7
MCM
Motif
Other DBs
NCBI-ProteinID:
AVF33474
UniProt:
A0A2L1UKN3
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Position
83442..84779
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AA seq
445 aa
AA seq
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MTIRKAASLLLVDDDPSLLKLLGMRLTSEGFRVTTAESGAEALRVLHRERIDLVLSDLRM
DEMDGMALFAEIQKFQPGMPVIILTAHGSIPDAVAATQQGVFGFLTKPVDRDALYKAIDE
ALAQSSPSVDESWRESIVTRSPLMLRLLEQANMVAQSDVSVLINGQSGTGKEVLAQAIHG
ASPRGKNAFIAINCGALPEQLLESELFGHAKGAFTGAISSREGLFQAASGGTLFLDEIGD
MPLSLQVKLLRVLQERKVRPLGSNQDIDVDVRIISATHRDLPKAMEKGEFREDLFYRLNV
VSLKLPTLSDRAEDIPLLANHLLRVAAQRHKPFVRSFSTDALKRLMAASWPGNVRQLVNV
IEQCVALTSAPVISEALVQQALEGENTALPTFADARNQFELNYLRKLLQITKGNVTQAAR
IAGRNRTEFYKLLSRHELEATDFKE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgacgatacgtaaagcagccagtttattgctggtggatgacgatccgagcctgttaaag
ctgctgggtatgcgtctgaccagtgaaggttttcgtgtcacgaccgccgaaagcggggcc
gaagcgctgcgcgtattgcaccgtgaacgcatcgatctggtgctgagcgatttacgcatg
gatgaaatggatggcatggcgctttttgccgagatccaaaagtttcagccgggaatgccg
gtcattattctgacggcgcacggctcaattcccgatgccgttgccgccacgcagcagggc
gttttcggttttctcaccaaaccggtcgaccgtgatgcgttgtataaagccattgatgaa
gcgctggcgcagtccagcccgtcagtggatgaaagctggcgcgagtcgattgtgacccgc
agtccgctgatgttgcgtttgctggagcaggccaatatggtcgcgcaatctgacgtcagc
gtgctgattaacggccagagcggcacgggtaaagaagtgctggcgcaggcgattcacggt
gccagcccgcgcggaaagaatgcgtttattgccatcaactgcggcgcgctgccggaacag
ttgctggaatctgaattattcggccacgccaaaggcgcatttaccggcgcgatcagcagc
cgggaagggctttttcaggcggccagcggcggaacgttgttcctcgatgaaatcggcgac
atgccactgtcattgcaggtcaaactgctgcgcgttttgcaggagcgcaaagtccgtccg
ctgggcagcaatcaggatatcgacgttgatgtgcggattatttctgcgacgcaccgcgat
ttgccgaaagcgatggaaaaaggcgagttccgcgaagacctgttttatcgtctgaacgtc
gtgagcctgaagctgccgacgctgagtgacagggcggaagacattccgctgctggcaaac
catctgcttcgcgtggcggcacagcgccacaaaccgtttgtccgcagtttttccaccgat
gcgctgaaacggctgatggcggcgagctggccgggcaatgtgcgtcagctggtgaacgtg
atcgagcagtgcgtggcgctgacttccgcgccggtcatcagcgaagcgctggtgcagcag
gcgctggaaggcgaaaacactgcactgccgacgtttgctgatgcgagaaaccagtttgaa
ctgaattatctgcgtaaacttttgcagataaccaaaggcaatgtgacgcaggcggcgcgt
atcgccgggcgtaaccgcactgaattttacaagctgctttcccgccatgaactggaagcc
acggactttaaagagtaa
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