Rahnella sikkimica: BV494_00410
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Entry
BV494_00410 CDS
T05331
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rox
Rahnella sikkimica
Pathway
rox00260
Glycine, serine and threonine metabolism
rox00460
Cyanoamino acid metabolism
rox00630
Glyoxylate and dicarboxylate metabolism
rox00670
One carbon pool by folate
rox00680
Methane metabolism
rox01100
Metabolic pathways
rox01110
Biosynthesis of secondary metabolites
rox01120
Microbial metabolism in diverse environments
rox01200
Carbon metabolism
rox01230
Biosynthesis of amino acids
rox01240
Biosynthesis of cofactors
rox04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BV494_00410
09102 Energy metabolism
00680 Methane metabolism
BV494_00410
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BV494_00410
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BV494_00410
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BV494_00410
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BV494_00410
Enzymes [BR:
rox01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BV494_00410
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Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AVF33477
UniProt:
A0A2L1UKL7
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Position
86991..88244
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AA seq
417 aa
AA seq
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MLKREMNIADYDAELWAAMEKEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADFANVQPHSGSQANFAVYTALLQPGDTILGMN
LGHGGHLTHGSPVNLSGKLYNVVPYGINESGDIDYDDVKRQAEAHKPKMIIGGFSAFSGI
VDWAKMREIADSVGAYFFVDMAHVAGLIAAGVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGSEEFYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKAYQQQVAKNAQAMVA
VVLERGYKVVSGGTHNHLFLMDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GVRIGTPAVTRRGFKEAEVRELAGWICDVLDNVNDEATIERVKNKVLDICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgctgagctgtgggcagcaatggaa
aaagaagttgttcgccaggaagaacatatcgagctgattgcgtcagaaaactacaccagc
ccgcgcgttatgcaggctcagggttcgcagctgaccaacaaatatgccgaaggctatccg
ggcaaacgttattacggtggctgtgagtacgtcgacatcgttgagcaactggctatcgac
cgtgcaaaagaattgttcggtgcggatttcgctaacgttcagccacactccggctcacag
gctaactttgcggtttacaccgcactgctgcaaccgggcgacaccattctggggatgaac
ctcggccacggtggtcacctgacgcacggttctccggtcaacctgtccggtaaactttat
aacgtggtgccttacggcatcaacgaaagcggcgacatcgactatgacgacgttaagcgt
caggccgaagcacacaaaccaaaaatgatcatcggtggcttctcagccttctccggtatc
gttgactgggcaaaaatgcgcgaaatcgcagacagcgttggcgcgtacttcttcgtcgac
atggcacacgttgccggtctgattgcggcgggcgtctacccgaacccggttccacatgca
cacatcgtcacgaccaccacgcacaaaacactggctggcccgcgcggcggtctgattctg
gcgaaaggtggcagcgaagagttctacaaaaaactgaactccgccgtcttccctggcggt
cagggcggcccgctgatgcacgtgattgccggtaaagcggtagcactgaaagaagcgatg
gagcctgagttcaaagcgtaccagcagcaggttgctaaaaacgcacaggcgatggtggct
gtggttctggaacgtggctacaaagtggtttccggcggtacgcacaaccacctgttcctg
atggatctggtcgataaaaacctgaccggtaaagaagctgatgccgctctgggtcgtgcc
aacatcaccgtgaacaaaaacagcgtgccaaacgatccgaagagcccgttcgtcacctcc
ggtgtacgtatcggtacgccggctgtgacccgtcgcggcttcaaagaagctgaagtacgt
gagctggctggctggatctgtgacgtgctggacaacgtgaacgacgaagccactatcgaa
cgcgttaaaaacaaagttctcgatatctgtgcacgcttcccggtttacgcataa
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