Rahnella sikkimica: BV494_00505
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Entry
BV494_00505 CDS
T05331
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rox03009
]
BV494_00505
Ribosome biogenesis [BR:
rox03009
]
Prokaryotic type
GTPases
BV494_00505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
cobW
Roc
AAA_22
Ras
ABC_tran
AAA_24
DUF5906
SRPRB
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
AVF33496
UniProt:
A0A2L1UKN7
LinkDB
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Position
107550..109034
Genome browser
AA seq
494 aa
AA seq
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MIPVVALVGRPNVGKSTLFNRLTKTRDALVADFPGLTRDRKYGRAEIEGNEFIIVDTGGI
DGTEDGVETRMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSREKSTFLVANKT
DGLDPDSAIGDFYSLGLGEVYAIAASHGRGVAQLIEHVLVPFVGEKPEEVELTEEEANAA
YWAEQEATGDEIPEDEEDDFDPTTLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGT
TRDSIYIPMVRDEREYVLIDTAGVRKRGKVTETVEKFSVIKTLKAIEDANVVMLVVDARD
GISDQDLSLLGFILNSGRSLLIVVNKWDGMSEEARAQVKDQLDLRLGFVDFARIHFISAL
HGSGVGNLFESVIEAYTCATTRVSTSMLTRIMQMAADDHQPPLVNGRRVKLKYAHAGGYN
PPIVVIHGNQVKDLADSYKRYLMNYFRRSLKVMGTPIRIQFKEGENPYEGKKNSLSPHQQ
RKRRRLMQHLKNKS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgatacctgtcgttgcgcttgtagggcgcccgaatgtgggtaaatccactttatttaac
cgtttaaccaagacgcgtgatgcgctggttgcggatttcccggggcttacgcgtgaccgc
aagtatggtcgtgcagaaattgagggtaatgaattcatcatcgttgataccggcggtatc
gacggtacggaagatggcgtcgaaacccgcatggccgggcagtcactgctggcaatcgaa
gaagccgacatcgtcttattcatggtcgatgcacgtgcgggcctgatgcctgccgatcag
ggcattgcccagcatcttcgcagccgtgaaaaatcgacattcctggtggcgaacaaaact
gacggtttagatcctgacagtgcgatcggcgatttctattccctcggtctgggcgaagtc
tacgcaatcgcggcttctcatggtcgtggcgtcgcgcaactgatcgaacacgttctggtg
ccgtttgttggcgaaaaaccagaagaagttgagctgacggaagaagaagccaacgccgct
tactgggctgaacaggaagcaaccggtgatgaaatcccggaagatgaagaagacgatttc
gacccaacgactttgccgatcaaactggctatcgtcgggcgtccgaacgtgggtaagtcc
acactgactaaccgtattctgggtgaagagcgcgtcgtggtttacgacatgccgggtacc
acccgtgacagtatttatatcccgatggtgcgtgatgagcgtgaatacgttctgatcgac
accgccggtgtccgtaagcgcgggaaagtcactgaaacggttgagaaattctccgttatc
aaaacgctgaaagcgattgaagatgctaacgtcgtgatgctggtcgtcgatgcccgcgac
ggtatctccgatcaggatctttcgctgctgggcttcatccttaacagcggtcgctcactg
ctgattgtggtgaacaagtgggacggaatgagtgaagaagcccgtgctcaggtcaaagat
cagctggatctgcgcctcggttttgttgactttgcgcgtatccacttcatttctgctctg
cacggcagcggcgtgggcaacctgtttgaatccgtgattgaagcgtatacctgcgcgacc
actcgcgtgagcacttccatgctgacccgcatcatgcagatggccgctgacgaccatcag
ccaccgctggtaaacggtcgccgcgttaaactgaaatatgcgcatgccgggggctataac
ccgccaatcgtggtcatccacggtaaccaggtgaaagatctggctgattcctacaaacgc
tatctgatgaactacttccgtcgttcactgaaagtgatggggacgcctatccgcattcag
ttcaaagagggcgagaacccgtatgagggtaagaaaaactcgctgtcgccgcaccagcaa
cgtaagcgccgacgcctgatgcagcacctgaaaaacaaatcctaa
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