Rahnella sikkimica: BV494_00545
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Entry
BV494_00545 CDS
T05331
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rox
Rahnella sikkimica
Pathway
rox03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BV494_00545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rox03400
]
BV494_00545
Enzymes [BR:
rox01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BV494_00545
DNA repair and recombination proteins [BR:
rox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BV494_00545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF2884
AAA_13
TFIIA
APG6
Prominin
Motif
Other DBs
NCBI-ProteinID:
AVF33504
UniProt:
A0A2L1UKR1
LinkDB
All DBs
Position
complement(116819..118192)
Genome browser
AA seq
457 aa
AA seq
DB search
MPLPSSPPIFTVSRLNQTVRQLLENEMGQVWLSGEISNFSQPSSGHWYFTLKDDRAQVKC
AMFRNTNRRTTFRPQNGQQVLVRATITLYEPRGDYQLIAESMQEAGDGLLQQKFDLLKQQ
LAAEGLFDTQFKQPLPSPAKCVGVITSASGAALHDVLNVLKRRDPSLPVIIYPTSVQGVD
APGQIVRAIAIANAREEVDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELISRNQLELLRQIQSQQQRLEMAMDYYLAQLAQRFSRLN
HRLQQQHPHLRLARQQTALFKLRRRLDEAMQNHLRQILRRSDRLQQRLTQQQPQPRIHRA
QQRVQQLQYRLQQAMSSQLAQSRQRFGTACTQLEAVSPLATLARGYSVTTTPKGTLLKKT
TQTAPGEILKTRLADGWIESEVKAVVAEKKTRKRAVK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgccactaccttcttcgcctcctatttttaccgtaagccgcctcaatcagacggtccga
cagttgctggaaaacgaaatgggtcaggtctggctctccggtgagatctcaaacttctcc
cagccttcctccggccactggtatttcacgctcaaagatgaccgcgcacaggtcaaatgc
gccatgttccgcaataccaacaggcgcaccacgtttcgtccgcaaaacggtcagcaggtt
ttggtccgcgcgaccattacattgtatgaaccgcgcggcgattatcagctgattgccgag
agtatgcaggaagccggtgacggtttattgcagcagaaattcgatttactgaaacaacag
ctggccgccgaagggttgttcgacacgcagttcaaacagccgttgccctcaccggcaaaa
tgcgtcggggtcattacctcggccagcggtgccgcgctgcacgatgtgctgaacgtgctc
aaacgccgcgatccttccctgcccgtcataatctatccgacctccgttcagggcgtggat
gcgccggggcaaattgtccgcgccattgcgatcgccaatgcccgcgaagaagtcgatgtg
ctgattgtcgggcgcggtggcggttcactggaagatttgtggagctttaacgatgagcgc
gtggcgcgggcgattttcgccagccgtattccgattgtcagcgccgtcggccatgaaacc
gacgtaaccattgccgacttcgttgcggatttacgcgccccgacaccgtcggccgccgca
gagttgatcagccgtaatcagctggagttgctgcgccagattcagtcacagcagcagcgt
cttgaaatggcgatggattattatctcgcacagctggcgcaacgtttttcgcgtcttaat
caccgcctgcagcaacagcatccgcatttacgtctggcgcgccagcaaacggcgttgttc
aaactgcgccgccgtctggatgaagcgatgcaaaaccatctgcgccagattctgcgccgt
agcgacaggctgcaacagcgtctgactcagcaacaaccgcaaccgcgaattcaccgcgcc
cagcaacgggttcagcagctgcaataccggctgcaacaggcaatgtcatcgcagcttgca
caaagccgccagcgttttggtacggcctgcacgcagcttgaagcggtcagcccgctggct
acgctggcaaggggttacagcgtgacgactacgccaaaaggcactttgctgaagaaaacg
acccagacggcacccggtgagattctgaaaacacggcttgccgatggctggattgaaagt
gaagtgaaagcggtggtggcggaaaagaaaacgcggaaacgtgcggttaaataa
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