Rahnella sikkimica: BV494_01010
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Entry
BV494_01010 CDS
T05331
Name
(GenBank) transcriptional regulator CsgD
KO
K04333
LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rox03000
]
BV494_01010
Transcription factors [BR:
rox03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
BV494_01010
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GFIT
Motif
Pfam:
GerE
VpsT-like_REC
Sigma70_r4_2
HTH_23
HTH_24
HTH_38
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AVF37320
UniProt:
A0A2L1UWL0
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Position
complement(213111..213761)
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AA seq
216 aa
AA seq
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MSNEAAINNNILLLVTKPSLQASALLQQLKQQLYVNTRLHNIHKSLEDQYLQETLILFDM
MEADRRTIDSWQSAINRYHSSVKLLLLNTPDNYHFREIETWPRISAVFYLSTDEEHLVEG
IRSVIRGECYFSQGFASYLINQSGAFRHLHSEDTGLTHREKEILNKLRVGASNTEIARLL
FISENTVKTHLYNLFRKISVKNRTQAASWANDNLKR
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgaagcagcaatcaataataatattcttttattagtgaccaaaccatcatta
caagccagtgctttattgcagcaattaaaacaacaactttacgtgaatacccggttgcat
aatattcataagtctctggaggatcagtatcttcaggagacattaattcttttcgatatg
atggaagctgatcgccggaccattgattcatggcagtccgccattaaccggtatcacagc
agcgtgaagttattactgctcaatacgcccgacaattaccatttccgtgaaatcgaaacc
tggccacggatcagcgccgttttttatctttcgaccgatgaagaacatctggtggaaggc
atcagaagcgtgatccgcggggaatgctatttctctcaggggttcgccagctatctgatc
aaccagtccggcgctttccgccaccttcacagcgaagacaccggcctgactcaccgtgaa
aaagagatcctgaataaattacgtgttggcgcgtcgaacacggaaatcgcacgtctgctg
tttatcagtgagaacaccgtcaaaacgcatctttataatttattcaggaaaatttccgtc
aagaaccgtactcaggcggcttcctgggctaacgacaatctcaagcgctga
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