Rahnella sikkimica: BV494_01420
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Entry
BV494_01420 CDS
T05331
Name
(GenBank) GntR family transcriptional regulator
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rox03000
]
BV494_01420
Transcription factors [BR:
rox03000
]
Prokaryotic type
Helix-turn-helix
GntR family
BV494_01420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
Motif
Other DBs
NCBI-ProteinID:
AVF33663
UniProt:
A0A2L1UL56
LinkDB
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Position
complement(295402..296916)
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AA seq
504 aa
AA seq
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MINTNFSPSIRPIMANLSQPSALITLFENADKTTGLRDRLCAVLRKAINTDALAVGQRLP
SSRMLAADLKVSRITVEAAYAQIEAEGYLQRQTGKGTFVSQSLPRPSATRAKGHTPAKLS
TLSARGRDIVATGGCNDPQFPTAFAAGSPDLRAFPLKIWKQITAKQLRTQGERLLGYGDP
QGYLPLRQAIAGYLQQSRGVLCSADHIMITTSSQQALQLLSMLLIDPNDTVWLEEPGYPG
ARNAFTSAGARLCAIPVDEQGISPADDSPSPRLIYLTPSHHYPTGVSLSLSRRLHILDYA
KRQESWIIEDDYDSELHYDGRPLPAMQGLDKHQQVIYLGTFSKVLFPSLRLAYIVLPPSL
VAPMVTLRTVSDGHSSQLMQAVTAEFIQSGHFASHLRLSRQLYQSRRDHLLEQIRQKIDW
LTPQVAAGGLQIAAHLPAGQEQRLSALAAKAGIETPRLSPLFLNQSELHALHRDGWLLGF
SALTPAEIASAVNRLAAINTGAFN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgattaataccaatttcagcccatcaataagacccattatggctaacctgtctcaaccg
tcggctttgattacgctttttgaaaacgcggacaaaacgaccggcctgcgcgaccggctt
tgcgcggtgctgcggaaggccattaataccgatgcgctggctgtcgggcagcggcttcct
tcttcacgaatgctggctgccgatttaaaagtctcacgcattacagtggaagcggcctat
gcgcagatagaagccgaagggtatttgcagcgccagaccggaaaagggacattcgtcagc
cagtcacttccccgcccttctgcgacacgagcaaaagggcacacacccgcgaaactttcc
acgctttcagcgcggggccgggacattgtggcaaccggcggctgcaacgacccgcaattc
cccacggctttcgcagcaggctcccccgatttacgcgcgtttcccctgaaaatctggaag
caaatcaccgctaaacaattgcgcacgcaaggcgaacgtttgctgggttatggcgatccg
cagggatatttaccccttcgccaggcgattgccggttatctgcaacagtcgcgcggcgta
ctgtgttccgctgatcacatcatgatcaccaccagttcccagcaggcactgcaactgttg
tcgatgttgctgattgatcctaacgatacagtctggcttgaagaacccggttatccggga
gcccgtaatgcgtttaccagtgccggtgcgcgcctttgtgcgataccggtggatgaacag
ggcatcagtccggctgacgactctccttcgccgcgtctgatctatctcacgccttctcac
cattaccccactggcgtaagcctgagtctgtcccgccgtctgcatatactggattacgcc
aaacgtcaggaaagctggatcattgaggacgattacgacagcgaactgcattacgacgga
cgcccccttccggccatgcaggggctggacaagcaccagcaagttatctatctgggcacc
ttctcaaaggttttattcccctcgctgcgtctggcttacatcgtgctgcccccgtcactg
gtcgcaccgatggtgacgctgcgaaccgtcagtgacggtcattcttcacagctgatgcag
gcggtgaccgcagaatttatacaaagcggtcatttcgcctcgcacctgcgtctttcccgc
cagctttatcagagccgccgcgatcatctgctggagcaaatccggcaaaaaattgactgg
ctgaccccgcaggttgcggccgggggcttacagatcgcggcgcatttgcctgccggacaa
gaacagcgactcagtgcactggccgccaaagcgggcatcgaaaccccacgcctttccccg
ctgtttctcaatcagagcgaactccacgcgctgcatcgcgatggctggttgctgggcttt
tctgccctcacgcccgcagaaattgcttccgccgttaaccggctggccgctatcaatacc
ggcgcgttcaactga
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