Rahnella sikkimica: BV494_01910
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Entry
BV494_01910 CDS
T05331
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rox03400
]
BV494_01910
DNA repair and recombination proteins [BR:
rox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
BV494_01910
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
DUF7577
SWI2_SNF2
AAA_30
zf-tcix
AAA_16
Zn_ribbon_3
SLFN-g3_helicase
DZR
Zn_Ribbon_1
LonC_helical
DUF7621
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-ProteinID:
AVF33756
UniProt:
A0A2L1ULE2
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Position
complement(421836..423599)
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AA seq
587 aa
AA seq
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MTAFTLRPYQQDAVDATLRHFRQHDEPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVK
ELVAQNHSKYLSYGLEADIFAAGLNLKQSSGKVVFGSVQSVAPNLAEFSGEFSLLIVDEC
HRISDDDKSQYQQIIGHLKAQNPRLRLLGLTATPYRLGKGWIYQYHHQGFVRGDSSSLFR
DCIYELPLRYMIKNGFLVPPERLDMPVVSYDFSRLQANSSGLFSEADLNDELRQQKRITP
HIISQIVEFAHDRKGVMIFASTVEHAGEIFGLLPKGEAALISAQTHAIERDRLITAFKQQ
ELRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCLILDYAGN
PHDLFTPEVGSHKPAGDNKPVQVFCPACGFANIFWGKTTEDGTVIEHFGRRCQGVLEDDD
GNREQCDFRFRFKSCPHCGAENDIAARRCHQCQEILVDPDDMLKAALRLKDALVLRCGGM
NLEHGRDDKGEWLKITYYDEDGADVSERFRLQTPAQRMAFLHNFLRPHQRAPGVPLEWKS
AADIVAQQVLLRHPDFVVARMKGQFWQVREKMFDYEGRYRRANELRG
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcttttacccttcgcccctatcagcaggatgccgtagacgccacgctgcgtcat
ttccgccagcacgatgaaccggcggtgatcgtattgcctaccggtgccggaaaaagcctg
gtgattgccgagctggcaagggtggcgcgcggacgcgtactggttctggcacacgtcaaa
gaactggtggcgcagaatcacagcaaatacctctcttacgggctggaagcggatatcttc
gcggcgggtctgaatctcaaacaaagcagcggcaaagtggtgttcggcagcgtgcagtcc
gtcgcgcccaatctggcggaattcagcggcgagttttccctgctgattgtcgacgagtgc
caccgcatttccgacgacgataaaagccagtaccagcaaatcatcggccatctcaaagcg
caaaacccgcgtctgcgtctgctcggcctgacggcaacgccctatcgtctgggtaaaggc
tggatttatcagtatcaccatcagggctttgtgcgcggcgattccagcagtcttttccgc
gattgcatttacgaattgccgttgcgttatatgatcaaaaacggctttctggtgccgccg
gaacggctcgatatgccggtggttagctatgatttcagccgcttacaggccaacagcagc
ggactgttcagcgaggcggatcttaacgatgagctgcgtcagcaaaaacgtattacgccg
cacatcatcagccagattgttgagttcgcacacgaccgcaaaggcgtgatgatttttgcc
tcaacggtggaacacgccggtgagattttcggtttgctgcccaaaggcgaagcggcgctg
atcagcgcacaaacccacgccatcgagcgtgaccggctgatcaccgcctttaaacaacag
gaactgcgctatctggtgaacgtctcagtgctgaccaccggctttgacgcgccgcatgtg
gatctgattgccattttgcgccccaccgaatcggtcagcctttatcagcaaattgtcggg
cgcgggctgcgtctgtcgccgggcaaaacggattgcctgatcctcgattacgccggcaat
ccgcatgacctgtttacgccggaagtgggcagtcacaaaccggcgggcgacaacaaaccg
gtgcaggtcttctgcccggcctgcggtttcgccaatatattctggggaaagaccaccgaa
gacggcacggttatagaacattttggccgccgctgtcagggcgtgctggaagatgacgac
ggcaaccgcgagcagtgtgatttccgtttccgcttcaaaagctgcccgcactgcggcgcg
gaaaacgatattgcggcgcggcgctgtcatcagtgtcaggaaattctggtcgacccggac
gatatgctgaaggccgcgctgcgcctgaaagatgcgctggtcttgcgctgcggcggcatg
aatcttgaacacgggcgcgacgacaaaggcgaatggctgaaaatcacctattacgatgag
gacggcgcggacgtttccgagcgtttccgcctgcaaacgcccgcccagcggatggcgttt
ttgcataattttctgcgcccgcatcagcgcgcaccgggcgtgccgctggaatggaaatca
gccgcagatatcgtggcgcagcaggttttactgcgtcatccggattttgtcgtcgcgcgg
atgaaaggccagttctggcaggtgcgtgagaagatgttcgattatgaagggcgttaccgg
cgcgccaatgagctgcgcgggtga
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