KEGG   Rahnella sikkimica: BV494_01910
Entry
BV494_01910       CDS       T05331                                 
Name
(GenBank) ATP-dependent helicase
  KO
K19789  DNA repair protein RadD
Organism
rox  Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:rox00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rox03400]
    BV494_01910
DNA repair and recombination proteins [BR:rox03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     BV494_01910
SSDB
Motif
Pfam: ResIII Helicase_C DEAD DUF7577 SWI2_SNF2 AAA_30 zf-tcix AAA_16 Zn_ribbon_3 SLFN-g3_helicase DZR Zn_Ribbon_1 LonC_helical DUF7621 Zn_ribbon_tTFIIB
Other DBs
NCBI-ProteinID: AVF33756
UniProt: A0A2L1ULE2
LinkDB
Position
complement(421836..423599)
AA seq 587 aa
MTAFTLRPYQQDAVDATLRHFRQHDEPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVK
ELVAQNHSKYLSYGLEADIFAAGLNLKQSSGKVVFGSVQSVAPNLAEFSGEFSLLIVDEC
HRISDDDKSQYQQIIGHLKAQNPRLRLLGLTATPYRLGKGWIYQYHHQGFVRGDSSSLFR
DCIYELPLRYMIKNGFLVPPERLDMPVVSYDFSRLQANSSGLFSEADLNDELRQQKRITP
HIISQIVEFAHDRKGVMIFASTVEHAGEIFGLLPKGEAALISAQTHAIERDRLITAFKQQ
ELRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCLILDYAGN
PHDLFTPEVGSHKPAGDNKPVQVFCPACGFANIFWGKTTEDGTVIEHFGRRCQGVLEDDD
GNREQCDFRFRFKSCPHCGAENDIAARRCHQCQEILVDPDDMLKAALRLKDALVLRCGGM
NLEHGRDDKGEWLKITYYDEDGADVSERFRLQTPAQRMAFLHNFLRPHQRAPGVPLEWKS
AADIVAQQVLLRHPDFVVARMKGQFWQVREKMFDYEGRYRRANELRG
NT seq 1764 nt   +upstreamnt  +downstreamnt
gtgaccgcttttacccttcgcccctatcagcaggatgccgtagacgccacgctgcgtcat
ttccgccagcacgatgaaccggcggtgatcgtattgcctaccggtgccggaaaaagcctg
gtgattgccgagctggcaagggtggcgcgcggacgcgtactggttctggcacacgtcaaa
gaactggtggcgcagaatcacagcaaatacctctcttacgggctggaagcggatatcttc
gcggcgggtctgaatctcaaacaaagcagcggcaaagtggtgttcggcagcgtgcagtcc
gtcgcgcccaatctggcggaattcagcggcgagttttccctgctgattgtcgacgagtgc
caccgcatttccgacgacgataaaagccagtaccagcaaatcatcggccatctcaaagcg
caaaacccgcgtctgcgtctgctcggcctgacggcaacgccctatcgtctgggtaaaggc
tggatttatcagtatcaccatcagggctttgtgcgcggcgattccagcagtcttttccgc
gattgcatttacgaattgccgttgcgttatatgatcaaaaacggctttctggtgccgccg
gaacggctcgatatgccggtggttagctatgatttcagccgcttacaggccaacagcagc
ggactgttcagcgaggcggatcttaacgatgagctgcgtcagcaaaaacgtattacgccg
cacatcatcagccagattgttgagttcgcacacgaccgcaaaggcgtgatgatttttgcc
tcaacggtggaacacgccggtgagattttcggtttgctgcccaaaggcgaagcggcgctg
atcagcgcacaaacccacgccatcgagcgtgaccggctgatcaccgcctttaaacaacag
gaactgcgctatctggtgaacgtctcagtgctgaccaccggctttgacgcgccgcatgtg
gatctgattgccattttgcgccccaccgaatcggtcagcctttatcagcaaattgtcggg
cgcgggctgcgtctgtcgccgggcaaaacggattgcctgatcctcgattacgccggcaat
ccgcatgacctgtttacgccggaagtgggcagtcacaaaccggcgggcgacaacaaaccg
gtgcaggtcttctgcccggcctgcggtttcgccaatatattctggggaaagaccaccgaa
gacggcacggttatagaacattttggccgccgctgtcagggcgtgctggaagatgacgac
ggcaaccgcgagcagtgtgatttccgtttccgcttcaaaagctgcccgcactgcggcgcg
gaaaacgatattgcggcgcggcgctgtcatcagtgtcaggaaattctggtcgacccggac
gatatgctgaaggccgcgctgcgcctgaaagatgcgctggtcttgcgctgcggcggcatg
aatcttgaacacgggcgcgacgacaaaggcgaatggctgaaaatcacctattacgatgag
gacggcgcggacgtttccgagcgtttccgcctgcaaacgcccgcccagcggatggcgttt
ttgcataattttctgcgcccgcatcagcgcgcaccgggcgtgccgctggaatggaaatca
gccgcagatatcgtggcgcagcaggttttactgcgtcatccggattttgtcgtcgcgcgg
atgaaaggccagttctggcaggtgcgtgagaagatgttcgattatgaagggcgttaccgg
cgcgccaatgagctgcgcgggtga

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