Rahnella sikkimica: BV494_01915
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Entry
BV494_01915 CDS
T05331
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rox03009
]
BV494_01915
Enzymes [BR:
rox01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
BV494_01915
Ribosome biogenesis [BR:
rox03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BV494_01915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
CON_HrpB
Motif
Other DBs
NCBI-ProteinID:
AVF33757
UniProt:
A0A2L1ULF1
LinkDB
All DBs
Position
423989..424696
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AA seq
235 aa
AA seq
DB search
MRLDKFLSQQLGVSRALVLRELRNKRVTVDGEIVKTGSMKISPEQRVEFDGNVLDQITGP
RYFMLNKPQGYVCSTDDPDHPTVLYFLEEPVAYKLHAAGRLDIDTTGLVLMTDDGQWSHR
ITSPRHHCEKTYLVTLENPLADDTAAQFEAGVQLHNEDSLTKPATLEQIEEKLVRLTLSE
GRYHQVKRMFAAVGNRVVALHRERIGEIVMDEDLEPGQYRPLTEQEIASVGVPTR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggacaagtttctatctcagcaattaggtgtaagccgcgcgctcgttttacgt
gagctgcgcaacaaacgtgtcaccgttgacggcgaaatcgtcaaaaccggctcgatgaaa
atcagccctgaacagcgcgtcgagtttgacggcaatgtgctggatcaaatcaccggcccg
cgttatttcatgctcaacaaaccgcaaggttacgtgtgttccaccgatgacccggatcat
ccgaccgtgctgtatttcctcgaagaaccggtggcgtacaaactgcatgccgcagggcgt
ctggatatcgacaccaccggtctggtgttaatgaccgacgatggccagtggtcgcaccgc
atcacttcgccgcgccatcattgtgagaaaacctatctggtgacgctcgaaaatccgctg
gctgacgacaccgccgcgcagtttgaagcgggcgttcagctgcataatgaagattccctg
accaaaccggcgacactcgagcaaatcgaagagaaactggtgcgtctgaccctcagcgaa
ggccgttaccatcaggtaaaacgcatgtttgcggcggtcggtaaccgcgtggtcgcgctg
caccgtgagcggatcggcgaaatcgtgatggatgaagatctagaaccgggccagtaccgg
cctttaactgagcaggaaattgccagcgttggcgttcccacgcgctag
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