Rahnella sikkimica: BV494_02675
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Entry
BV494_02675 CDS
T05331
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rox03032
]
BV494_02675
03036 Chromosome and associated proteins [BR:
rox03036
]
BV494_02675
03400 DNA repair and recombination proteins [BR:
rox03400
]
BV494_02675
DNA replication proteins [BR:
rox03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BV494_02675
Chromosome and associated proteins [BR:
rox03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BV494_02675
DNA repair and recombination proteins [BR:
rox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BV494_02675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HAAS
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
AVF33902
UniProt:
A0A2L1ULU2
LinkDB
All DBs
Position
604201..604485
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIERLAGQHSHIPAKAVEDAVKEMLEHMAATLADGERIEIRGFGSFSLHYRAPRV
GRNPKTGDKVELDGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaacttattgaaagacttgctggccagcactctcatatcccggcgaaa
gctgttgaggatgcagtgaaagagatgcttgagcatatggctgcaaccttggctgatggt
gaacgcatcgaaatccgtgggtttggcagtttttctcttcactaccgtgctccgcgtgtg
gggcgtaaccctaaaacgggcgataaagttgagctggacggcaagtacgttccgcacttc
aagccaggtaaagagttgcgtgatcgcgcgaacatttatggctaa
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