Rahnella sikkimica: BV494_02875
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Entry
BV494_02875 CDS
T05331
Name
(GenBank) porin OmpA
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rox02000
]
BV494_02875
Transporters [BR:
rox02000
]
Other transporters
Pores ion channels [TC:
1
]
BV494_02875
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
Opacity
DEC-1_N
DUF1358
Motif
Other DBs
NCBI-ProteinID:
AVF33941
UniProt:
A0A2L1UM01
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All DBs
Position
complement(654555..655631)
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AA seq
358 aa
AA seq
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MKKTAIALAVALAGFATVAQAAPKDNTWYTGGKLGWSQYHDTGFANAYKGIGNGPTHDSQ
LGAGAFLGYQANQYLGFEMGYDWLGRMPYKGSVNNGAFKAQGVQLAAKLSYPLTDDLDLY
TRLGGMVWRADSKGNFGGTGERVSDHDTGVSPLAAVGVEYAVTKNWATRLDYQWVNNIGD
AQTVGARPDNGMLSVGVSYRFGQDDVAPVVAPAPAPAPAPVVETKKFTLKSDVLFNFNKA
TLKPEGQQALDQLYSQLSSIDPKDGSVIVLGYTDRIGSEQYNQKLSEQRAQSVVDYLVSK
GIPSNKISAQGQGKSNPVTGSTCNSVKGRAALIDCLAPDRRVEIEVKGYKDTVTQPQA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacagctatcgcattagcagtggcactggcaggtttcgctaccgtagcgcaa
gccgcccctaaagataacacctggtataccggtggtaaattgggctggtcccaataccat
gacactggtttcgcaaatgcttacaaaggtatcggcaacggccctacccacgatagccaa
ctgggtgcaggtgcgttcttgggttaccaagcgaaccaatacctgggctttgaaatggga
tatgactggcttggccgtatgccttacaaaggcagcgtgaacaatggcgcgttcaaagca
caaggcgttcagctggctgctaaactgagctacccgctgactgacgatctggacctttac
acccgtctgggtggtatggtttggcgtgcagactctaaaggtaacttcggtggtactggt
gagcgcgtaagcgatcacgacactggcgtttctccactggcagcagtgggtgttgaatac
gcagtaaccaaaaactgggctacccgtctggattaccagtgggttaacaacatcggcgac
gcgcagactgttggcgcacgtccagacaacggcatgctgtctgtaggtgtttcttaccgt
ttcggtcaggatgatgttgcaccagttgttgctccagctccagctccagcaccagctcca
gttgttgaaactaagaaattcactctgaagtctgacgttctgttcaacttcaacaaagcg
actctgaaaccagaaggccaacaggctctggatcagctgtacagccagttgagttcaatc
gatcctaaagacggttcagttatcgttctgggttacaccgaccgtatcggttcagaacaa
tacaaccagaaactgtctgagcaacgtgcacagagcgtagtggattacctggtatctaaa
ggtatcccttccaacaagatctctgcacaaggtcaaggtaaatctaacccagttactggt
tctacctgtaactccgttaaaggccgtgctgctctgatcgactgcctggcaccagaccgt
cgtgttgaaatcgaagttaaaggctacaaagacactgttactcagccacaggcttaa
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