Rahnella sikkimica: BV494_03015
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Entry
BV494_03015 CDS
T05331
Name
(GenBank) transcriptional regulator
KO
K14056
HTH-type transcriptional regulator, repressor for puuD
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rox03000
]
BV494_03015
Transcription factors [BR:
rox03000
]
Prokaryotic type
Helix-turn-helix
Other families
BV494_03015
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
Cupin_2
HTH_31
HTH_19
HTH_26
MqsA_antitoxin
HTH_37
AraC_binding
HTH_25
MPI_cupin_dom
KH_KRR1_1st
Motif
Other DBs
NCBI-ProteinID:
AVF33967
UniProt:
A0A2L1UM04
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All DBs
Position
complement(683093..683650)
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AA seq
185 aa
AA seq
DB search
MSEVSLAPGRRLSEIRQQLGMSQRKAAELSGLTHSAISTIEQDKVSPAVSTLQKLLRVYG
LSLSEFFAEERKSDEPRIVINAADLIEIGSRGVSMRMVHNGTPNHAVAMLLETYQPGSTT
GDKIKHQGEEVGTLLEGEIILTLNGQSYPLRAGQSYAINTANPHSFSNISTWICRIVSAH
TPNTF
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtcagtctggcaccgggtcgccggctttctgaaattcgtcagcaactgggc
atgtcacaacgtaaagccgccgagttgtctggcctgacgcacagcgccatcagtaccatc
gaacaggacaaagtcagccccgccgtcagtacgttgcagaagttattgcgggtttacggg
ctgtcgttatcggagtttttcgccgaagaacgcaaaagtgacgagccgagaattgtcatt
aatgcggcagacttgattgagatcggcagccggggggtttccatgcgaatggtgcataac
ggcacgccaaaccacgcggtcgccatgctgctggaaacctatcagcccggcagcacaacg
ggcgacaaaattaaacatcagggagaggaagtcggcaccctgctcgaaggagaaatcatc
ttaaccctcaacgggcagagttacccgctgcgggcgggccaaagctatgcgattaacacc
gcgaaccctcacagtttcagtaatatttcgacgtggatttgcaggatagtcagcgcacat
actcctaataccttctag
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