Rahnella sikkimica: BV494_03620
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Entry
BV494_03620 CDS
T05331
Name
(GenBank) transcriptional regulator
KO
K03746
DNA-binding protein H-NS
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rox03036
]
BV494_03620
03400 DNA repair and recombination proteins [BR:
rox03400
]
BV494_03620
Chromosome and associated proteins [BR:
rox03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
BV494_03620
DNA repair and recombination proteins [BR:
rox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BV494_03620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
DUF6626
PaaX_C
DUF6280
TetR_C_24
SpoIIIAH
Motif
Other DBs
NCBI-ProteinID:
AVF34080
UniProt:
A0A2L1UMB2
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Position
complement(818956..819363)
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AA seq
135 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEDSQAAAEIEERTRKLQQ
YREMLIADGIDPNELLQTMAATKATGKAKRAARPAKYKYVDENGENKTWTGQGRTPAVIK
KAIEEQGKSLDDFLL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcattaaagattctgaacaacatccgtactctgcgtgcgcaagcaagagaa
tgcactctggaaactctggaagagatgctggaaaaattagaagttgttgtgaacgagcgt
cgcgaagaagattctcaggctgctgctgagattgaagagcgcacccgtaaactgcaacaa
tatcgcgaaatgctgattgctgacggtattgaccctaacgaattgctgcaaactatggct
gctaccaaagcaaccggtaaagcaaaacgtgcagcgcgtcctgctaaatacaaatacgtt
gatgagaacggcgaaaacaaaacttggactggccagggtcgtactccagccgtgatcaag
aaagcaatcgaagagcaaggtaaatcactggacgatttcctgctgtaa
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