KEGG   Rahnella sikkimica: BV494_03620
Entry
BV494_03620       CDS       T05331                                 
Name
(GenBank) transcriptional regulator
  KO
K03746  DNA-binding protein H-NS
Organism
rox  Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:rox00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rox03036]
    BV494_03620
   03400 DNA repair and recombination proteins [BR:rox03400]
    BV494_03620
Chromosome and associated proteins [BR:rox03036]
 Prokaryotic type
  Nucleoid associated proteins
   HNS (histone-like nucleoid structuring protein)
    BV494_03620
DNA repair and recombination proteins [BR:rox03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BV494_03620
SSDB
Motif
Pfam: Histone_HNS_N Histone_HNS DUF3037 DUF6626 PaaX_C DUF6280 TetR_C_24 SpoIIIAH
Other DBs
NCBI-ProteinID: AVF34080
UniProt: A0A2L1UMB2
LinkDB
Position
complement(818956..819363)
AA seq 135 aa
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEDSQAAAEIEERTRKLQQ
YREMLIADGIDPNELLQTMAATKATGKAKRAARPAKYKYVDENGENKTWTGQGRTPAVIK
KAIEEQGKSLDDFLL
NT seq 408 nt   +upstreamnt  +downstreamnt
atgagcgaagcattaaagattctgaacaacatccgtactctgcgtgcgcaagcaagagaa
tgcactctggaaactctggaagagatgctggaaaaattagaagttgttgtgaacgagcgt
cgcgaagaagattctcaggctgctgctgagattgaagagcgcacccgtaaactgcaacaa
tatcgcgaaatgctgattgctgacggtattgaccctaacgaattgctgcaaactatggct
gctaccaaagcaaccggtaaagcaaaacgtgcagcgcgtcctgctaaatacaaatacgtt
gatgagaacggcgaaaacaaaacttggactggccagggtcgtactccagccgtgatcaag
aaagcaatcgaagagcaaggtaaatcactggacgatttcctgctgtaa

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