Rahnella sikkimica: BV494_03765
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Entry
BV494_03765 CDS
T05331
Name
(GenBank) 23S rRNA pseudouridylate synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rox03009
]
BV494_03765
Enzymes [BR:
rox01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BV494_03765
Ribosome biogenesis [BR:
rox03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BV494_03765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF2520
ASFV_J13L
Extensin_1
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
AVF34107
UniProt:
A0A2L1UME1
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All DBs
Position
849829..851148
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AA seq
439 aa
AA seq
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MSEKYNSQKHTSDKSKPARSSGDKPKSGRNSGAAKSRPEPSRAEKRGEKPRTDKPRTDKP
RTDKPRTDKPRTDKPRADAGRSDSRSDSRIEKPRMGKPARPENARDDKKRPLKPRGTKPK
AEALFDENGDEEEVKYQKPKNALDSTEGQTEKLQKVLARAGHGSRREVEAMIQAGRVSVD
GKIATLGDRVEVTGGTKIRLDGHVLSVMESQDTVCRVLAYYKPEGELCTRSDPEGRPTVF
DRLPKMRGSRWIAVGRLDVNTSGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDEK
IKQLSRGVQLEDGPAAFRSIKFQGGEGLNQWYNVTLTEGRNREVRRLWEAVGVQVSRLIR
VRYGDLNLPKGLPRGGYKELDLPDINYLRTLVDMTEETVSKLPVERDRRRVKANQIRRAV
KRHTSVAPARRTTGPAKRG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaagtataattcccagaagcacaccagcgacaaatccaaaccggcacgttcg
tctggtgacaagcctaaaagcggcagaaattccggcgcagcgaaaagccgtccggaaccg
tcgcgggctgaaaagcgtggtgaaaaaccacgtaccgacaagccacgtaccgataagcca
cgtactgacaaaccgcgtactgataaaccgcgtaccgataagccgcgtgcagacgcaggt
cgcagcgattcacgttctgattcccgcattgaaaaaccccgcatgggtaaaccggcacgt
ccggaaaatgcgcgcgatgataaaaagcgtccgctgaaaccacgtggcaccaagcctaaa
gctgaagcactgtttgatgaaaacggtgacgaagaagaagtgaagtaccagaagccgaaa
aacgcgctggacagcaccgaagggcaaactgaaaaactgcaaaaagttctcgcgcgtgcg
ggccacggttcacgtcgtgaagttgaagcgatgatccaggctggccgcgtcagcgttgac
ggtaaaatcgcgacgctgggcgaccgtgttgaagtgaccggtgggacgaaaatccgtctc
gatggccacgtgctgtcggtgatggagtctcaggacaccgtctgccgcgtgctggcatac
tacaaaccggaaggcgaactgtgtacgcgcagtgatccggaagggcgtccgaccgtgttt
gaccgcttgccgaaaatgcgcggttcacgctggattgccgtgggtcgtctggacgttaac
acctcgggcctgctgttatttaccaccgacggtgaactggctaaccgcctgatgcacccg
agccgtgaagtggaacgtgagtatgcggtacgcgtattcggtcaggttgatgatgaaaaa
atcaaacaactgagccgtggcgtgcagctggaagacggccctgccgctttccgctccatc
aaattccagggcggcgaaggcctgaaccagtggtacaacgtgaccctgacagaagggcgt
aaccgtgaagttcgtcgtctgtgggaagccgttggcgtccaggtcagccgtctgatccgc
gtgcgttacggtgatctgaacctgcctaaaggcctgcctcgcggcggctataaagagctg
gatctgccggacatcaactatctgcgcacactggtcgatatgacagaagaaaccgtcagc
aaactgccggttgagcgcgatcgtcgtcgtgttaaagccaaccagatccgtcgcgccgtt
aagcgccacacgtctgtggctccggcacgtcgcaccaccggcccggctaaacggggttaa
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