Rahnella sikkimica: BV494_04405
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Entry
BV494_04405 CDS
T05331
Name
(GenBank) transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rox03000
]
BV494_04405
Transcription factors [BR:
rox03000
]
Prokaryotic type
Helix-turn-helix
Other families
BV494_04405
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
HTH_29
LigT_PEase
HTH_24
HTH_Crp_2
Penicillinase_R
MarR
AmiR_N
DUF3640
Motif
Other DBs
NCBI-ProteinID:
AVF37347
UniProt:
A0A2L1UWQ8
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Position
complement(990844..991713)
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AA seq
289 aa
AA seq
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MNTLEKIQTSLDILSKSERKVAEVILASPHIAIHSSIATLARMADVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVNRNVDESDSVSAYTSKIFESAMASLDQVKNTLDIAAINR
AVDLLTQAKKISFFGLGASAAVAHDAMNKFFRFNIPVVYFDDIVMQRMSCMNSSEGDVVV
LISHTGRTKNLVELAQLARENDATVIAITSFNTPLAHEATLALLLDVPEDTDVYMPMVSR
IAQLTLIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKGIVVPNLLE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatacattggaaaaaatccagaccagccttgacattctgagcaagtcagaacgcaaa
gttgccgaagttatcctcgcatcgccgcacattgccattcattccagtattgccaccctg
gcccgcatggccgacgtcagtgagcctactgtaaaccgtttttgccgtcgtctcgacaca
aaagggtttccagattttaaactgcatctggcacaaagtctggcaaacggtacaccttat
gtgaaccgtaacgtggatgaaagtgacagcgtcagcgcttacaccagtaaaatctttgaa
tctgcgatggccagcctcgatcaggtgaaaaacaccctggacatcgccgccatcaaccgc
gcggtcgatttactcacgcaggccaaaaagatttccttcttcgggctgggtgcttccgcc
gccgtggcgcatgatgccatgaacaaatttttccgcttcaacattcccgtggtctacttc
gatgacatcgtcatgcagcgcatgagttgcatgaattccagcgaaggcgacgtcgtcgtg
ctgatttctcacaccggacgcaccaaaaatctggtggaactcgcgcaacttgcccgcgaa
aacgatgccacagtgattgccattacctcttttaatacgccgctggcgcacgaagccacg
ctcgcgctgttgctggacgttcccgaagacaccgacgtttatatgccaatggtctcgaga
attgcgcaactgacgttgatcgacgtgctggcgaccggttttactttgcgccgtggcgca
aaattcagagataacctgaagcgggtcaaagaagcgttgaaagaatcgcgctttgataag
ggtatcgtcgtccctaacctgcttgaatga
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