Rahnella sikkimica: BV494_04440
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Entry
BV494_04440 CDS
T05331
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rox
Rahnella sikkimica
Pathway
rox00061
Fatty acid biosynthesis
rox00071
Fatty acid degradation
rox01100
Metabolic pathways
rox01212
Fatty acid metabolism
rox02024
Quorum sensing
rox04146
Peroxisome
Module
rox_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BV494_04440
00071 Fatty acid degradation
BV494_04440
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BV494_04440
09145 Cellular community - prokaryotes
02024 Quorum sensing
BV494_04440
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rox01004
]
BV494_04440
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rox04147
]
BV494_04440
Enzymes [BR:
rox01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BV494_04440
Lipid biosynthesis proteins [BR:
rox01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BV494_04440
Exosome [BR:
rox04147
]
Exosomal proteins
Exosomal proteins of breast milk
BV494_04440
Exosomal proteins of breast cancer cells
BV494_04440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AVF34226
UniProt:
A0A2L1UMR3
LinkDB
All DBs
Position
998777..1000474
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AA seq
565 aa
AA seq
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MEKVWLKRYPADVPENIDPDRYSSLVEMFENATLCYADSPAFINMGEVMTFRKLEERSRA
FAAYLQNQLGLKKGDRVALMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELEHQLNDS
GASAIVIVSNFAHTLEKVVYKTQIKHVILTRMGDQLSAAKGTLVNFVVKYVKRLVPKYHL
PNAISFRSALQYGRRLQYIKPDIINDDLAFLQYTGGTTGVAKGAMLTHRNMQANLEQAKA
AYAPLLQPGHELVVTALPLYHIFALTVNCLLFLDLGGKSLLITNPRDVPGMVKELSKYPF
TAISGVNTLFNALLNNEDFRELDFSTLRLSVGGGMSVQKSVADKWEKLTGKHLLEGYGLT
ECSPLVAGNPYDLKHYSGSIGLPVPSTEVRLVDDNGQDVAPGQPGELWVRGPQVMLGYWQ
RPSATDEVLKDGWLSTGDIVTVDEQGFLRIVDRKKDMILVSGFNVYPNEIEEVVSQHDKV
LEVAAIGVPNESSGEIVKICVVKKDPSLTSEELLAHCRRLLTGYKVPKIVEFRDELPKSN
VGKILRRELRDEQAKPKDDTKQDAA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaggtttggctaaaacgttatccggcggatgttcccgagaacatcgaccctgac
cgctacagctcgctggtcgagatgtttgagaatgccacgctgtgctatgccgacagcccg
gcgtttatcaacatgggcgaggtcatgacgttccgtaagctcgaggagcgtagtcgtgct
tttgcggcctatctgcaaaaccagttggggctgaaaaaaggcgaccgcgtcgccctgatg
atgcctaatctgctgcaatatccgattgcgctgtttggcgtcttgcgcgcgggcatggtc
gtcgtgaacgttaacccgctgtatacgccgcgcgagctggaacatcagcttaacgatagc
ggtgccagcgccattgtgattgtgtccaactttgcccatacgctggaaaaagtggtctac
aaaacgcagatcaagcatgtgatcctgacccggatgggcgatcagctttctgcagcaaaa
ggcacactggttaattttgttgtcaaatatgtgaaacggctggtgcctaagtatcacctg
ccgaacgcgatttccttccgcagtgccctgcaatacgggcgtcgtttgcaatacatcaaa
cccgatatcatcaatgatgatctggcgtttctgcaatataccggcggaaccaccggcgtg
gcgaagggcgcgatgctgacgcaccggaacatgcaggccaatctggaacaggcaaaagcg
gcgtatgcgccgttgctgcaaccgggtcatgaactggtggtaacggcactgccgctgtat
cacatctttgcgctgacggtgaactgcctgttgttcctcgatctggggggtaaaagcctg
ctgattactaacccgcgtgatgtgccgggcatggtgaaagaactgtcgaaatacccgttc
accgccatcagcggggtgaatacgctgttcaacgcgctgctcaataatgaagatttccgt
gaactggatttctcgacgctgcgtctttccgtcggcggcgggatgtcggttcagaagtct
gtcgcggataagtgggaaaagctgaccggtaagcatttgctggaaggctatggcctgacg
gagtgttcgccgctggtggcaggcaacccgtatgatctgaaacattacagcggcagcatc
ggtttaccggtgccgtctacggaagtacgactggtggatgataacggccaggatgtcgcg
ccgggtcaacccggagagctgtgggtgcgcgggccgcaggtgatgctgggctactggcaa
cggccttcggcgaccgatgaggtgctaaaagatggctggttatcgacgggcgatatcgtt
acagtggacgagcagggctttttgcggattgtagatcgcaaaaaagacatgattctggtt
tccggtttcaatgtttaccctaacgaaattgaagaggtggtttcacaacatgacaaagta
ctcgaagttgccgccattggtgtgcccaacgagtcgtcgggtgaaatcgtcaaaatttgc
gtggtgaagaaagatccgtcactgaccagcgaagaacttctggcacattgtcgccggtta
ctaaccggttacaaagtaccgaagattgtcgagtttcgcgatgagttaccgaagtcaaat
gtcggtaagatcctcaggcgcgaacttcgcgatgagcaggcaaaaccgaaggacgatacg
aagcaggatgcggcataa
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